trnar-ccu_12


Basic Information

Item Value
gene id trnar-ccu_12
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 23748591 ~ 23748663 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnar-ccu_12
ggctccatagctcagtggACAGAGCGCTGGTCTCCTAAACCAGAGGTCGCGAGTTCGATTCTCGCTGGGGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnar-ccu_12 True 73 tRNA 0.60 1 23748591 23748663

Neighbor

gene id symbol gene type direction distance location
phyhipl phyhipl,phyhiplb,LOC107727060,LOC107746456,LOC107654056,LOC107695536 coding upstream 63033 23628687 ~ 23685558 (+)
bicc1 bicc1,LOC107653928,LOC107695510 coding upstream 154549 23418853 ~ 23594042 (+)
tfam NA coding upstream 352213 23387980 ~ 23396378 (+)
LOC111192392 LOC108416223 coding upstream 747968 22998679 ~ 23000623 (+)
dkk1 dkk1 coding upstream 1377104 22368776 ~ 22371487 (+)
LOC111192424 NA coding downstream 652455 24401118 ~ 24402659 (+)
LOC111192396 LOC108411010 coding downstream 883040 24631703 ~ 24648610 (+)
LOC103037544 adprh,LOC108274007,LOC108411014,LOC105894051,LOC106579059 coding downstream 903966 24652629 ~ 24663580 (+)
mto1 mto1 coding downstream 948473 24697136 ~ 24713813 (+)
LOC103035992 NA coding downstream 982237 24730900 ~ 24744132 (+)
G38633 NA non-coding upstream 224721 23520932 ~ 23523870 (+)
G38628 NA non-coding upstream 234623 23495072 ~ 23513968 (+)
G38611 NA non-coding upstream 294829 23453364 ~ 23453762 (+)
G38585 ube2d2,ube2d1b,ube2d1,LOC105891213,LOC107717106,LOC107553913,LOC106607701 non-coding upstream 361170 23380968 ~ 23387421 (+)
G38589 NA non-coding upstream 393466 23349878 ~ 23355125 (+)
G38717 NA non-coding downstream 29611 23778274 ~ 23845827 (+)
G38710 NA non-coding downstream 35302 23783965 ~ 23784746 (+)
G38723 NA non-coding downstream 81823 23830486 ~ 23951902 (+)
LOC107197179 NA non-coding downstream 637073 24385736 ~ 24388302 (+)
G38832 NA non-coding downstream 677783 24426446 ~ 24426725 (+)
trnar-ccu_11 NA other upstream 30 23748489 ~ 23748561 (+)
trnar-ccu_10 NA other upstream 132 23748387 ~ 23748459 (+)
trnar-ccu_9 NA other upstream 234 23748285 ~ 23748357 (+)
trnar-ccu_8 NA other upstream 336 23748183 ~ 23748255 (+)
trnar-ccu_7 NA other upstream 438 23748081 ~ 23748153 (+)
trnar-ccu_13 NA other downstream 30 23748693 ~ 23748765 (+)
trnar-ccu_14 NA other downstream 132 23748795 ~ 23748867 (+)
trnar-ccu_15 NA other downstream 234 23748897 ~ 23748969 (+)
trnar-ccu_16 NA other downstream 336 23748999 ~ 23749071 (+)
trnar-ccu_17 NA other downstream 438 23749101 ~ 23749173 (+)

Expression


Co-expression Network