trnar-ccu_16


Basic Information

Item Value
gene id trnar-ccu_16
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 23748999 ~ 23749071 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnar-ccu_16
ggctccatagctcagtggACAGAGCGCTGGTCTCCTAAACCAGAGGTCGCGAGTTCGATTCTCGCTGGGGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnar-ccu_16 True 73 tRNA 0.60 1 23748999 23749071

Neighbor

gene id symbol gene type direction distance location
phyhipl phyhipl,phyhiplb,LOC107727060,LOC107746456,LOC107654056,LOC107695536 coding upstream 63441 23628687 ~ 23685558 (+)
bicc1 bicc1,LOC107653928,LOC107695510 coding upstream 154957 23418853 ~ 23594042 (+)
tfam NA coding upstream 352621 23387980 ~ 23396378 (+)
LOC111192392 LOC108416223 coding upstream 748376 22998679 ~ 23000623 (+)
dkk1 dkk1 coding upstream 1377512 22368776 ~ 22371487 (+)
LOC111192424 NA coding downstream 652047 24401118 ~ 24402659 (+)
LOC111192396 LOC108411010 coding downstream 882632 24631703 ~ 24648610 (+)
LOC103037544 adprh,LOC108274007,LOC108411014,LOC105894051,LOC106579059 coding downstream 903558 24652629 ~ 24663580 (+)
mto1 mto1 coding downstream 948065 24697136 ~ 24713813 (+)
LOC103035992 NA coding downstream 981829 24730900 ~ 24744132 (+)
G38633 NA non-coding upstream 225129 23520932 ~ 23523870 (+)
G38628 NA non-coding upstream 235031 23495072 ~ 23513968 (+)
G38611 NA non-coding upstream 295237 23453364 ~ 23453762 (+)
G38585 ube2d2,ube2d1b,ube2d1,LOC105891213,LOC107717106,LOC107553913,LOC106607701 non-coding upstream 361578 23380968 ~ 23387421 (+)
G38589 NA non-coding upstream 393874 23349878 ~ 23355125 (+)
G38717 NA non-coding downstream 29203 23778274 ~ 23845827 (+)
G38710 NA non-coding downstream 34894 23783965 ~ 23784746 (+)
G38723 NA non-coding downstream 81415 23830486 ~ 23951902 (+)
LOC107197179 NA non-coding downstream 636665 24385736 ~ 24388302 (+)
G38832 NA non-coding downstream 677375 24426446 ~ 24426725 (+)
trnar-ccu_15 NA other upstream 30 23748897 ~ 23748969 (+)
trnar-ccu_14 NA other upstream 132 23748795 ~ 23748867 (+)
trnar-ccu_13 NA other upstream 234 23748693 ~ 23748765 (+)
trnar-ccu_12 NA other upstream 336 23748591 ~ 23748663 (+)
trnar-ccu_11 NA other upstream 438 23748489 ~ 23748561 (+)
trnar-ccu_17 NA other downstream 30 23749101 ~ 23749173 (+)
trnar-ccu_18 NA other downstream 132 23749203 ~ 23749275 (+)
trnar-ccu_19 NA other downstream 234 23749305 ~ 23749377 (+)
trnar-ccu_20 NA other downstream 336 23749407 ~ 23749479 (+)
trnar-ccu_21 NA other downstream 438 23749509 ~ 23749581 (+)

Expression


Co-expression Network