trnar-ccu_24


Basic Information

Item Value
gene id trnar-ccu_24
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 23749815 ~ 23749887 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnar-ccu_24
ggctccatagctcagtggACAGAGCGCTGGTCTCCTAAACCAGAGGTCGCGAGTTCGATTCTCGCTGGGGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnar-ccu_24 True 73 tRNA 0.60 1 23749815 23749887

Neighbor

gene id symbol gene type direction distance location
phyhipl phyhipl,phyhiplb,LOC107727060,LOC107746456,LOC107654056,LOC107695536 coding upstream 64257 23628687 ~ 23685558 (+)
bicc1 bicc1,LOC107653928,LOC107695510 coding upstream 155773 23418853 ~ 23594042 (+)
tfam NA coding upstream 353437 23387980 ~ 23396378 (+)
LOC111192392 LOC108416223 coding upstream 749192 22998679 ~ 23000623 (+)
dkk1 dkk1 coding upstream 1378328 22368776 ~ 22371487 (+)
LOC111192424 NA coding downstream 651231 24401118 ~ 24402659 (+)
LOC111192396 LOC108411010 coding downstream 881816 24631703 ~ 24648610 (+)
LOC103037544 adprh,LOC108274007,LOC108411014,LOC105894051,LOC106579059 coding downstream 902742 24652629 ~ 24663580 (+)
mto1 mto1 coding downstream 947249 24697136 ~ 24713813 (+)
LOC103035992 NA coding downstream 981013 24730900 ~ 24744132 (+)
G38633 NA non-coding upstream 225945 23520932 ~ 23523870 (+)
G38628 NA non-coding upstream 235847 23495072 ~ 23513968 (+)
G38611 NA non-coding upstream 296053 23453364 ~ 23453762 (+)
G38585 ube2d2,ube2d1b,ube2d1,LOC105891213,LOC107717106,LOC107553913,LOC106607701 non-coding upstream 362394 23380968 ~ 23387421 (+)
G38589 NA non-coding upstream 394690 23349878 ~ 23355125 (+)
G38717 NA non-coding downstream 28387 23778274 ~ 23845827 (+)
G38710 NA non-coding downstream 34078 23783965 ~ 23784746 (+)
G38723 NA non-coding downstream 80599 23830486 ~ 23951902 (+)
LOC107197179 NA non-coding downstream 635849 24385736 ~ 24388302 (+)
G38832 NA non-coding downstream 676559 24426446 ~ 24426725 (+)
trnar-ccu_23 NA other upstream 30 23749713 ~ 23749785 (+)
trnar-ccu_22 NA other upstream 132 23749611 ~ 23749683 (+)
trnar-ccu_21 NA other upstream 234 23749509 ~ 23749581 (+)
trnar-ccu_20 NA other upstream 336 23749407 ~ 23749479 (+)
trnar-ccu_19 NA other upstream 438 23749305 ~ 23749377 (+)
trnar-ccu_25 NA other downstream 30 23749917 ~ 23749989 (+)
trnar-ccu_26 NA other downstream 132 23750019 ~ 23750091 (+)
trnar-ccu_27 NA other downstream 234 23750121 ~ 23750193 (+)
G38817 NA other downstream 224274 23974161 ~ 23974520 (+)
G38870 NA other downstream 866897 24616784 ~ 24617452 (+)

Expression


Co-expression Network