G99368


Basic Information

Item Value
gene id G99368
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 234857 ~ 235793 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU134007
gagagattctcctgatctggtagtagaaggtagttagttagaggtgttaggagagtaagtgctctttgaagagctctgtcttcaggagtttattaaagatagtgagagattctcctgatctggtagtagaaggtagtttgttccaccattggggaactctgtatgagaacagtctggattgctttgtgtgagttaCATTACTGCATGTGAACCAGAGTGACAGATGACCCACCATTAACCCCAAACCCTGCGTACAGTGGCTCAGTGAAGCTACAGTGGAAGGTGTGTATGAGGTTCGGTGTATCTGTGGTTGAGGCGACACTGTAGAAGGTCAGAGTGCCGGCCGGCTGGTCCAGGTACACCCCCACCCTGCGGCACTGTGGATCTGAGGCTGGAACCTTAGTGGTGAGGTCACTGTGCTGTAGAGCGTAGTGGTCACCAGCACAGGTCAGACTCCAGGACGTTGTGTTGGGTCCGAACATCTCGTCGGTCTCGGTTTTCCTTGCGACCCCTCTGTAGGTCACGGCTACCGTCGCTTTTCCACCGCACTCCACCTCCCAATAACTGCGGTCACGTAAACTCTCCACACACAACACCTGAGCGAGCCAATCAGATCTCTCTGGGTTATGGGGATTCTCCTGCTGGAGTCCCTCCCACGATGCCTTTCGGTTTCCTTCAGACAGCGAGAGGCAAGAGTCAGCGGTGTTCACATCCAGGGTAAGACCACAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134007 True 731 lncRNA 0.52 2 234857 235793

Neighbor

gene id symbol gene type direction distance location
LOC103028503 NA coding upstream 11636 216013 ~ 223221 (+)
LOC111193578 NA coding upstream 46258 187147 ~ 188599 (+)
LOC107197101 NA coding upstream 52208 177680 ~ 182649 (+)
LOC103033028 NA coding upstream 65153 162996 ~ 169704 (+)
LOC103027555 NA coding upstream 109708 98126 ~ 125149 (+)
rexo5 NA coding downstream 40860 276653 ~ 293379 (+)
gtf3c1 NA coding downstream 75873 311666 ~ 341737 (+)
LOC107197104 NA coding downstream 219079 454872 ~ 459776 (+)
LOC103026069 NA coding downstream 306152 541945 ~ 548280 (+)
LOC103043293 LOC108413567,LOC107572909 coding downstream 420875 656668 ~ 728123 (+)
G99367 NA non-coding upstream 484 232927 ~ 234373 (+)
G99356 NA non-coding upstream 34284 197666 ~ 200573 (+)
G99345 NA non-coding upstream 140675 92045 ~ 94182 (+)
G99344 NA non-coding upstream 146290 86699 ~ 88567 (+)
G99340 NA non-coding upstream 157835 66706 ~ 77022 (+)
G99373 NA non-coding downstream 12147 247940 ~ 249482 (+)
G99352 thumpd1 non-coding downstream 28583 264376 ~ 265137 (+)
G99377 NA non-coding downstream 32648 268441 ~ 271128 (+)
G99382 NA non-coding downstream 49487 285280 ~ 286085 (+)
G99466 NA non-coding downstream 104306 340099 ~ 372617 (+)
LOC103031902 NA other upstream 197793 20991 ~ 37064 (+)
G99561 NA other downstream 238867 474660 ~ 482219 (+)
LOC103036139 NA other downstream 251681 487474 ~ 496376 (+)
LOC111193579 NA other downstream 298236 534029 ~ 540471 (+)
LOC111193492 NA other downstream 354390 590183 ~ 593200 (+)
ubl5 ubl5 other downstream 872683 1108476 ~ 1110592 (+)

Expression


Co-expression Network