LOC103036139


Basic Information

Item Value
gene id LOC103036139
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 487474 ~ 496376 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU134297
TCTCCAGGCTGCTGAGTGTTCAGCTGGAGCTTCAGGTGACTCAGGTGCGCTGGATGGGGGAGAAGGCAGCAGCAGAGGTTCTGATTAAAGATCTTCAGAAGCATCTGGAGGAGAAAGAGGATAAGATCTCCAGACTGCTGGCCAAGAACATCTATCTGGATAAAAAGCTGGCGGATCTGATGGCCGAGTGCGACGACATCCAGGTGAAATTCAATGAATTATCTGATCAGTTGGAGGCCACGCTGGGAAAACTACCCAACACCAACCTGAAATACGTTCTGGAGATTGTTACGCTGAATATCGACATCGACAGCATCAGAGAAACCATCACCAGAGAGAAATCCCTCAGCAAGATCGAGGaactgaAGAAACTGCTGAAGAAGAAAACTGATGAGCTTAACCTGAAGAAGTACGAGTTAAAAAACAAAGATCCCAGCGCTGTAAAAAttCTGGTGATCATCGAGAAAACGAAGGAGATCCAGAATCTGCAGAGCAGCGTTGTGAATGTGAACGATTTGGATTCAATCAGCAagcTTCAGAAAGAACTGATCAAACTGATTGATGACCTGGACGATTCCAATCCTGCCAAACTAGG
>TU134298
TCTCCAGGCTGCTGAGTGTTCAGCTGGAGCTTCAGGTGACTCAGGTGCGCTGGATGGGGGAGAAGGCAGCAGCAGAGGTTCTGATTAAAGATCTTCAGAAGCATCTGGAGGAGAAAGAGGATAAGATCTCCAGACTGCTGGCCAAGAACATCTATCTGGATAAAAAGCTGGCGGATCTGATGGCCGAGTGCGACGACATCCAGGTGAAATTCAATGAATTATCTGATCAGTTGGAGGCCACGCTGGGAAAACTACCCAACACCAACCTGAAATACGTTCTGGAGATTGTTACGCTGAATATCGACATCGACAGCATCAGAGAAACCATCACCAGAGAGAAATCCCTCAGCAAGATCGAGGaactgaAGAAACTGCTGAAGAAGAAAACTGATGAGCTTAACCTGAAGAAGTACGAGTTAAAAAACAAAGATCCCAGCGCTGTAAAAAttCTGGTGATCATCGAGAAAACGAAGGAGATCCAGAATCTGCAGAGCAGCGTTGTGAATGTGAACGATTTGGATTCAATCAGCAagcTTCAGAAAGAACTGATCAAACTGATTGATGACCTGGACGATTCCAATCCTGCCAAACTAGG
>XM_022674982.1
ATGGATGAATGTGATAATGAGGAAGATGATGATAATGGGAATGAAGAAGATGATAACGGTAATGATGAAGAtgataacgATGATAATGGTAATGAAGAAGATGATAATGGTAATGAAGAAGATGATAACGGTAATGAAGAAGATGATAACGGTAATGATGAAGATGATAACGGTAATGAAGAAGATGATAATGGTAATGATGAAGATGATAACGGTAATGATGAAGATGATAATGGTAATGAAGAAGATGATAATGGTAATGATGAAGATGATAACGGTAATGATGAAGATGATAATGGTAATGAAGAAGATGATAACGATAATGATGAAGATGATAATGGTAATGAAGAAGATGATAATGTCTCCAGGCTGCTGAGTGTTCAGCTGGAGCTTCAGGTGACTCAGGTGCGCTGGATGGGGGAGAAGGCAGCAGCAGAGGTTCTGATTAAAGATCTTCAGAAGCATCTGGAGGAGAAAGAGGATAAGATCTCCAGACTGCTGGCCAAGAACATCTATCTGGATAAAAAGCTGGCGGATCTGATGGCCGAGTGCGACGACATCCAGGTGAAATTCAATGAATTATCTGATCAGTTGGAGGCCACGCTGGGAAAACTACCCAACACCAACCTGAAATACGTTCTGGAGATTGTTACGCTGAATATCGACATCGACAGCATCAGAGAAACCATCACCAGAGAGAAATCCCTCAGCAAGATCGAGGaactgaAGAAACTGCTGAAGAAGAAAACTGATGAGCTTAACCTGAAGAAGTACGAGTTAAAAAACAAAGATCCCAGCGCTGTAAAAAttCTGGTGATCATCGAGAAAACGAAGGAGATCCAGAATCTGCAGAGCAGCGTTGTGAATGTGAACGATTTGGATTCAATCAGCAGtgagttacttttattttattag

Function

GO:

id name namespace
GO:0008237 metallopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134297 False 595 TUCP 0.46 8 488023 496376
TU134298 False 595 TUCP 0.46 8 488023 496376
XM_022674982.1 True 915 mRNA 0.40 9 487474 494908

Neighbor

gene id symbol gene type direction distance location
LOC107197104 NA coding upstream 27698 454872 ~ 459776 (+)
gtf3c1 NA coding upstream 145737 311666 ~ 341737 (+)
rexo5 NA coding upstream 194095 276653 ~ 293379 (+)
LOC103028503 NA coding upstream 264253 216013 ~ 223221 (+)
LOC111193578 NA coding upstream 298875 187147 ~ 188599 (+)
LOC103026069 NA coding downstream 45569 541945 ~ 548280 (+)
LOC103043293 LOC108413567,LOC107572909 coding downstream 160292 656668 ~ 728123 (+)
LOC103030233 LOC108413570 coding downstream 238705 735081 ~ 757324 (+)
mvb12a NA coding downstream 272633 769009 ~ 779862 (+)
LOC111193580 NA coding downstream 310638 807014 ~ 809445 (+)
G99478 NA non-coding upstream 64170 381194 ~ 423304 (+)
G99497 NA non-coding upstream 67762 419206 ~ 419712 (+)
G99466 NA non-coding upstream 114857 340099 ~ 372617 (+)
G99382 NA non-coding upstream 201389 285280 ~ 286085 (+)
G99377 NA non-coding upstream 216346 268441 ~ 271128 (+)
G99568 NA non-coding downstream 4719 501095 ~ 529108 (+)
LOC111193491 NA non-coding downstream 33627 530003 ~ 532087 (+)
G99582 NA non-coding downstream 73281 569657 ~ 575403 (+)
G99588 NA non-coding downstream 83976 580352 ~ 580737 (+)
G99596 NA non-coding downstream 110004 606380 ~ 612000 (+)
G99561 NA other upstream 5255 474660 ~ 482219 (+)
LOC103031902 NA other upstream 450410 20991 ~ 37064 (+)
LOC111193579 NA other downstream 37653 534029 ~ 540471 (+)
LOC111193492 NA other downstream 93807 590183 ~ 593200 (+)
ubl5 ubl5 other downstream 612100 1108476 ~ 1110592 (+)
G99710 NA other downstream 685051 1181427 ~ 1184269 (+)
LOC111193582 NA other downstream 800039 1296415 ~ 1298377 (+)

Expression


Co-expression Network