G99596


Basic Information

Item Value
gene id G99596
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 606380 ~ 612000 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU134344
TGTCACGCGGCCGTGTTCTCCTTCCACGCTACCTGACTCCATTTCCCAAGATCCCATGAACAATAACGTCAACAACACacgctcaccttcacccaatcatgttacgctccgacgctcagactcacctgtgttctgagttagTTCCGGTTCATTCCCCTCTAgcttcctgtatttaaggcGGCCGCTTGTAAACAAACTCCGCGAGGTATTGTTAACTCATGTTACATACTAAGCATTTTCCTGTGTATtgtttttgccttctcgttacgaccctgttttcggattatcggtttatgtcttttgttttgccctttctggatttgatgtatggttggactgtttctcggttacgaactcggactgtatttttgactacgtcttctgtcatcggtgagatctttgtttgcctggctattctgttagcagtatctgttagctttactgctaataaacctgtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134344 True 458 lncRNA 0.45 2 606380 612000

Neighbor

gene id symbol gene type direction distance location
LOC103026069 NA coding upstream 58100 541945 ~ 548280 (+)
LOC107197104 NA coding upstream 146604 454872 ~ 459776 (+)
gtf3c1 NA coding upstream 264643 311666 ~ 341737 (+)
rexo5 NA coding upstream 313001 276653 ~ 293379 (+)
LOC103028503 NA coding upstream 383159 216013 ~ 223221 (+)
LOC103043293 LOC108413567,LOC107572909 coding downstream 44668 656668 ~ 728123 (+)
LOC103030233 LOC108413570 coding downstream 123081 735081 ~ 757324 (+)
mvb12a NA coding downstream 157009 769009 ~ 779862 (+)
LOC111193580 NA coding downstream 195014 807014 ~ 809445 (+)
LOC103028614 LOC108415945,LOC106564086 coding downstream 202460 814460 ~ 829481 (+)
G99588 NA non-coding upstream 25643 580352 ~ 580737 (+)
G99582 NA non-coding upstream 30977 569657 ~ 575403 (+)
LOC111193491 NA non-coding upstream 74293 530003 ~ 532087 (+)
G99568 NA non-coding upstream 77272 501095 ~ 529108 (+)
G99478 NA non-coding upstream 183076 381194 ~ 423304 (+)
G99604 NA non-coding downstream 19505 631505 ~ 631834 (+)
LOC103024499 NA non-coding downstream 178106 790106 ~ 792100 (+)
G99623 NA non-coding downstream 236199 848199 ~ 851469 (+)
G99642 NA non-coding downstream 284419 896419 ~ 896789 (+)
G99645 NA non-coding downstream 285347 897347 ~ 898314 (+)
LOC111193492 NA other upstream 13180 590183 ~ 593200 (+)
LOC111193579 NA other upstream 65909 534029 ~ 540471 (+)
LOC103036139 NA other upstream 110004 487474 ~ 496376 (+)
G99561 NA other upstream 124161 474660 ~ 482219 (+)
LOC103031902 NA other upstream 569316 20991 ~ 37064 (+)
ubl5 ubl5 other downstream 496476 1108476 ~ 1110592 (+)
G99710 NA other downstream 569427 1181427 ~ 1184269 (+)
LOC111193582 NA other downstream 684415 1296415 ~ 1298377 (+)
LOC111193593 NA other downstream 1233491 1845491 ~ 1853019 (+)
LOC103047668 NA other downstream 1273228 1885228 ~ 1889237 (+)

Expression


Co-expression Network