G99690 (LOC108412243)


Basic Information

Item Value
gene id G99690
gene name LOC108412243
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 1081118 ~ 1085797 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU134486
TCACCTGCTCCTCCGTTGATGAAGCCGCTAATGTGCAGCTTGTACCTGTAAGTTTCCGAGTCGATGTAGAAATTGGTGTAATGGGCGTAAACACTTCCTCTCTCAAAATCCTCCATGTAGATCCTCAGCTCATACTTTCCTCTGTTAGTAATGAGGAAGATGTTCTGCAGACCCAGCCAGTATTCACCGCTCGCGTTCCCAAAGCCGTTCTTGTACTCGTCCCACGGCCTGTAGAAATTCACACTGCCGTCCATCCTCCTCTGAAACACAGTCCACCTCCCTTTGTCTTCATCACAGCCCATATCACAGTAAACCTGCACTGGTTTACTGGATCCTCCGGGGTAGATGGTGTAAACCCCAGTGCTCACTGAGCCACTGTTATAAACATCTTCACAGTCCAGAGGCAGTGGGTCAGTAGAGGCAGGGGCTGACTGCACCACCAGGGGGAGCAccaggaacagcagcagcagctgaaaaaaaatta
>TU134488
TCACCTGCTCCTCCGTTGATGAAGCCGCTAATGTGCAGCTTGTACCTGTAAGTTTCCGAGTCGATGTAGAAATTGGTGTAATGGGCGTAAACACTTCCTCTCTCAAAATCCTCCATGTAGATCCTCAGCTCATACTTTCCTCTGTTAGTAATGAGGAAGATGTTCTGCAGACCCAGCCAGTATTCACCGCTCGCGTTCCCAAAGCCGTTCTTGTACTCGTCCCACGGCCTGTAGAAATTCACACTGCCGTCCATCCTCCTCTGAAACACAGTCCACCTCCCTTTGTCTTCATCACAGCCCATATCACAGTAAACCTGCACTGGTTTACTGGATCCTCCGGGGTAGATGGTGTAAACCCCAGTGCTCACTGAGCCACTGTTATAAACATCTTCACAGTCCAGAGGCAGTGGGTCAGTAGAGGCAGGGGCTGACTGCACCACCAGGGGGAGCAccaggaacagcagcagcagCATGTTACCAGTCCTGGGCAGGTGTGGTGAATCCTTCAGTACTCGTG

Function

NR:

description
PREDICTED: microfibril-associated glycoprotein 4-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134486 False 484 lncRNA 0.50 3 1081118 1085091
TU134488 True 517 lncRNA 0.52 5 1081118 1085797

Neighbor

gene id symbol gene type direction distance location
LOC103023562 NA coding upstream 113005 961275 ~ 968113 (+)
LOC103026766 NA coding upstream 129504 941924 ~ 951614 (+)
LOC103027056 LOC108413120 coding upstream 146917 904230 ~ 934201 (+)
LOC103027665 LOC108413281,LOC108412240 coding upstream 185318 889210 ~ 895800 (+)
LOC103027992 LOC108413169 coding upstream 196583 855966 ~ 884535 (+)
LOC103046652 NA coding downstream 65814 1151611 ~ 1171823 (+)
LOC111193496 NA coding downstream 132960 1218757 ~ 1228783 (+)
LOC103028492 NA coding downstream 147293 1233090 ~ 1236197 (+)
LOC103027248 LOC103027248 coding downstream 154366 1240163 ~ 1243893 (+)
LOC103027651 NA coding downstream 162770 1248567 ~ 1253895 (+)
G99682 NA non-coding upstream 18937 1061716 ~ 1062181 (+)
G99671 NA non-coding upstream 52894 1027849 ~ 1028224 (+)
G99657 NA non-coding upstream 89452 989974 ~ 991666 (+)
G99656 NA non-coding upstream 94850 984901 ~ 986268 (+)
G99654 NA non-coding upstream 100455 978730 ~ 980663 (+)
LOC103027978 NA non-coding downstream 171247 1257044 ~ 1289874 (+)
G99726 NA non-coding downstream 175945 1261742 ~ 1263514 (+)
G99734 NA non-coding downstream 247473 1333270 ~ 1333914 (+)
G99736 NA non-coding downstream 271295 1357092 ~ 1358954 (+)
G99899 NA non-coding downstream 291221 1377018 ~ 1419192 (+)
LOC111193492 NA other upstream 487918 590183 ~ 593200 (+)
LOC111193579 NA other upstream 540647 534029 ~ 540471 (+)
LOC103036139 NA other upstream 584742 487474 ~ 496376 (+)
G99561 NA other upstream 598899 474660 ~ 482219 (+)
LOC103031902 NA other upstream 1044054 20991 ~ 37064 (+)
ubl5 ubl5 other downstream 22679 1108476 ~ 1110592 (+)
G99710 NA other downstream 95630 1181427 ~ 1184269 (+)
LOC111193582 NA other downstream 210618 1296415 ~ 1298377 (+)
LOC111193593 NA other downstream 759694 1845491 ~ 1853019 (+)
LOC103047668 NA other downstream 799431 1885228 ~ 1889237 (+)

Expression


Co-expression Network