G100194


Basic Information

Item Value
gene id G100194
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 2309716 ~ 2310103 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU135225
tcagattagatcatcactacacacctccaaacttcatgtagcttcagattagttcatcactacacacctccaaacttcatgtagcttcagattagttcatcactacacacctccaaacttcatgtagcttcagattagatcatcactacacacctccaaacttcatgtagcttcagattagatcatcactacacacctccaaacttcatgtagcttcag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135225 True 219 lncRNA 0.40 2 2309716 2310103

Neighbor

gene id symbol gene type direction distance location
LOC103028349 NA coding upstream 79693 2222873 ~ 2230023 (+)
LOC103028654 rab1a,LOC108436370,LOC105021598,LOC107676578,LOC107666439,LOC106585917 coding upstream 96907 2205433 ~ 2212809 (+)
cenpm cenpm coding upstream 171510 2131980 ~ 2138206 (+)
LOC103037292 zgc:158803,LOC108411937,LOC108258445,LOC107700834,LOC107598467,LOC107709610,LOC107747154 coding upstream 179069 2117126 ~ 2130647 (+)
mri1 mri1,LOC107594353,LOC107703717,LOC107700835 coding upstream 193764 2099791 ~ 2115952 (+)
khsrp khsrp coding downstream 59853 2369956 ~ 2389979 (+)
LOC103025604 LOC108436360,LOC107598482,LOC107700849,LOC107747162 coding downstream 91451 2401554 ~ 2415821 (+)
LOC103022670 pgam1,LOC108436383,LOC108258456,LOC107729838,LOC107700858,LOC107598490 coding downstream 194382 2504485 ~ 2506380 (+)
exosc1 exosc1,LOC107700859,LOC107598491 coding downstream 198433 2508536 ~ 2518926 (+)
pkd1 pkd1 coding downstream 465055 2775158 ~ 2916200 (+)
G100177 NA non-coding upstream 46230 2261858 ~ 2263486 (+)
G100174 NA non-coding upstream 48481 2260659 ~ 2261235 (+)
G100175 NA non-coding upstream 49330 2259229 ~ 2260386 (+)
G100178 NA non-coding upstream 74554 2234890 ~ 2235162 (+)
G100149 NA non-coding upstream 160716 2148473 ~ 2149000 (+)
G100199 NA non-coding downstream 34930 2345033 ~ 2345669 (+)
G100202 NA non-coding downstream 45224 2355327 ~ 2356036 (+)
G100205 NA non-coding downstream 122052 2432155 ~ 2435667 (+)
G100216 NA non-coding downstream 180696 2490799 ~ 2493218 (+)
G100221 NA non-coding downstream 215454 2525557 ~ 2537407 (+)
LOC103031088 NA other upstream 257858 2040094 ~ 2051858 (+)
LOC103031617 NA other upstream 270974 2032895 ~ 2038742 (+)
LOC103038569 NA other upstream 293453 2012029 ~ 2016263 (+)
LOC103047668 NA other upstream 420479 1885228 ~ 1889237 (+)
LOC111193593 NA other upstream 456697 1845491 ~ 1853019 (+)
c12h19orf53 LOC103027500 other downstream 23504 2333607 ~ 2336332 (+)
LOC103026535 slc25a23a,LOC103026535,LOC107594260,LOC107703801,LOC107747161,LOC108258471 other downstream 33516 2343619 ~ 2368564 (+)
avpi1 NA other downstream 141298 2451401 ~ 2463385 (+)
LOC111193601 NA other downstream 183658 2493761 ~ 2500431 (+)
LOC111193505 NA other downstream 300414 2610517 ~ 2625505 (+)

Expression


Co-expression Network