G100199


Basic Information

Item Value
gene id G100199
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 2345033 ~ 2345669 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU135230
CCAATAGATATACATATAATAGATAGACCTCACCAGCCAATCGCAACGCAGGAAGGCGGGCGCTTGCCTGAATACAGGTGTAAAAAGAAACGCCCTTTACGTCCGCATGCCGCAGATGCCAGAGCACCACGTGACCACACCGTTTTGCAGTGCACTTCGAACGTGCGTCTAATCCAGATGTTCACCAACCGGGATtACGGCACACAGATGTGAATGACCATTAGTCAGAA

Function

NR:

description
myosin heavy chain, fast skeletal muscle-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135230 True 230 lncRNA 0.50 2 2345033 2345669

Neighbor

gene id symbol gene type direction distance location
vps54 vps54,LOC107709616 coding upstream 16771 2308299 ~ 2328262 (+)
LOC103028349 NA coding upstream 115010 2222873 ~ 2230023 (+)
LOC103028654 rab1a,LOC108436370,LOC105021598,LOC107676578,LOC107666439,LOC106585917 coding upstream 132224 2205433 ~ 2212809 (+)
cenpm cenpm coding upstream 206827 2131980 ~ 2138206 (+)
LOC103037292 zgc:158803,LOC108411937,LOC108258445,LOC107700834,LOC107598467,LOC107709610,LOC107747154 coding upstream 214386 2117126 ~ 2130647 (+)
khsrp khsrp coding downstream 24287 2369956 ~ 2389979 (+)
LOC103025604 LOC108436360,LOC107598482,LOC107700849,LOC107747162 coding downstream 55885 2401554 ~ 2415821 (+)
LOC103022670 pgam1,LOC108436383,LOC108258456,LOC107729838,LOC107700858,LOC107598490 coding downstream 158816 2504485 ~ 2506380 (+)
exosc1 exosc1,LOC107700859,LOC107598491 coding downstream 162867 2508536 ~ 2518926 (+)
pkd1 pkd1 coding downstream 429489 2775158 ~ 2916200 (+)
G100194 NA non-coding upstream 34930 2309716 ~ 2310103 (+)
G100177 NA non-coding upstream 81547 2261858 ~ 2263486 (+)
G100174 NA non-coding upstream 83798 2260659 ~ 2261235 (+)
G100175 NA non-coding upstream 84647 2259229 ~ 2260386 (+)
G100178 NA non-coding upstream 109871 2234890 ~ 2235162 (+)
G100202 NA non-coding downstream 9658 2355327 ~ 2356036 (+)
G100205 NA non-coding downstream 86486 2432155 ~ 2435667 (+)
G100216 NA non-coding downstream 145130 2490799 ~ 2493218 (+)
G100221 NA non-coding downstream 179888 2525557 ~ 2537407 (+)
G100237 NA non-coding downstream 237852 2583521 ~ 2584324 (+)
c12h19orf53 LOC103027500 other upstream 8701 2333607 ~ 2336332 (+)
LOC103031088 NA other upstream 293175 2040094 ~ 2051858 (+)
LOC103031617 NA other upstream 306291 2032895 ~ 2038742 (+)
LOC103038569 NA other upstream 328770 2012029 ~ 2016263 (+)
LOC103047668 NA other upstream 455796 1885228 ~ 1889237 (+)
avpi1 NA other downstream 105732 2451401 ~ 2463385 (+)
LOC111193601 NA other downstream 148092 2493761 ~ 2500431 (+)
LOC111193505 NA other downstream 264848 2610517 ~ 2625505 (+)
tekt4 LOC108436369 other downstream 296418 2642087 ~ 2650150 (+)
G100300 NA other downstream 698958 3044627 ~ 3046637 (+)

Expression


Co-expression Network