Gene
RNA
| Item | Value |
|---|---|
| gene id | G100237 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035908.1 |
| NCBI id | CM008311.1 |
| chromosome length | 31403898 |
| location | 2583521 ~ 2584324 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU135282 | True | 557 | lncRNA | 0.53 | 2 | 2583521 | 2584324 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| exosc1 | exosc1,LOC107700859,LOC107598491 | coding | upstream | 64595 | 2508536 ~ 2518926 (+) |
| LOC103022670 | pgam1,LOC108436383,LOC108258456,LOC107729838,LOC107700858,LOC107598490 | coding | upstream | 77141 | 2504485 ~ 2506380 (+) |
| LOC103025604 | LOC108436360,LOC107598482,LOC107700849,LOC107747162 | coding | upstream | 167700 | 2401554 ~ 2415821 (+) |
| khsrp | khsrp | coding | upstream | 193542 | 2369956 ~ 2389979 (+) |
| vps54 | vps54,LOC107709616 | coding | upstream | 255259 | 2308299 ~ 2328262 (+) |
| pkd1 | pkd1 | coding | downstream | 190834 | 2775158 ~ 2916200 (+) |
| nthl1 | nthl1 | coding | downstream | 413235 | 2997559 ~ 3004262 (+) |
| slc9a3r2 | slc9a3r2 | coding | downstream | 424537 | 3008861 ~ 3031715 (+) |
| LOC111193603 | NA | coding | downstream | 558726 | 3143050 ~ 3149166 (+) |
| LOC111193604 | NA | coding | downstream | 570894 | 3155218 ~ 3159534 (+) |
| G100221 | NA | non-coding | upstream | 46114 | 2525557 ~ 2537407 (+) |
| G100216 | NA | non-coding | upstream | 90303 | 2490799 ~ 2493218 (+) |
| G100205 | NA | non-coding | upstream | 147854 | 2432155 ~ 2435667 (+) |
| G100202 | NA | non-coding | upstream | 227485 | 2355327 ~ 2356036 (+) |
| G100199 | NA | non-coding | upstream | 237852 | 2345033 ~ 2345669 (+) |
| G100240 | NA | non-coding | downstream | 43362 | 2627686 ~ 2703276 (+) |
| G100245 | NA | non-coding | downstream | 45488 | 2629812 ~ 2633083 (+) |
| G100249 | NA | non-coding | downstream | 71307 | 2655631 ~ 2673061 (+) |
| G100251 | NA | non-coding | downstream | 80169 | 2664493 ~ 2718738 (+) |
| G100255 | NA | non-coding | downstream | 129730 | 2714054 ~ 2715786 (+) |
| LOC111193601 | NA | other | upstream | 83090 | 2493761 ~ 2500431 (+) |
| avpi1 | NA | other | upstream | 120136 | 2451401 ~ 2463385 (+) |
| LOC103026535 | slc25a23a,LOC103026535,LOC107594260,LOC107703801,LOC107747161,LOC108258471 | other | upstream | 214957 | 2343619 ~ 2368564 (+) |
| c12h19orf53 | LOC103027500 | other | upstream | 247189 | 2333607 ~ 2336332 (+) |
| LOC103031088 | NA | other | upstream | 531663 | 2040094 ~ 2051858 (+) |
| LOC111193505 | NA | other | downstream | 26193 | 2610517 ~ 2625505 (+) |
| tekt4 | LOC108436369 | other | downstream | 57763 | 2642087 ~ 2650150 (+) |
| G100300 | NA | other | downstream | 460303 | 3044627 ~ 3046637 (+) |
| LOC103046164 | NA | other | downstream | 504329 | 3088653 ~ 3117263 (+) |
| G100314 | NA | other | downstream | 574332 | 3158656 ~ 3209330 (+) |
