G100267


Basic Information

Item Value
gene id G100267
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 2782991 ~ 2783659 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU135337
GACTcttacagacacacagagactctGTCACACTCTTACAGACTCCTATATACTCCCTCAGACTCTTACAGACTCCCTCAGACTCTTACAGACTCCCTCAGACTCTTACAGACTTTCACAGTACTACCTACTCCCTCAGACACATACAGACTCCCTCAGGAACTCCCTCAGACACATACAGACTCCCTCAGACTCTTACAGACACCCTTAGACTCCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135337 True 218 lncRNA 0.48 2 2782991 2783659

Neighbor

gene id symbol gene type direction distance location
exosc1 exosc1,LOC107700859,LOC107598491 coding upstream 264065 2508536 ~ 2518926 (+)
LOC103022670 pgam1,LOC108436383,LOC108258456,LOC107729838,LOC107700858,LOC107598490 coding upstream 276611 2504485 ~ 2506380 (+)
LOC103025604 LOC108436360,LOC107598482,LOC107700849,LOC107747162 coding upstream 367170 2401554 ~ 2415821 (+)
khsrp khsrp coding upstream 393012 2369956 ~ 2389979 (+)
vps54 vps54,LOC107709616 coding upstream 454729 2308299 ~ 2328262 (+)
nthl1 nthl1 coding downstream 213900 2997559 ~ 3004262 (+)
slc9a3r2 slc9a3r2 coding downstream 225202 3008861 ~ 3031715 (+)
LOC111193603 NA coding downstream 359391 3143050 ~ 3149166 (+)
LOC111193604 NA coding downstream 371559 3155218 ~ 3159534 (+)
LOC111193506 NA coding downstream 380987 3164646 ~ 3170094 (+)
G100251 NA non-coding upstream 64253 2664493 ~ 2718738 (+)
G100256 NA non-coding upstream 64788 2715788 ~ 2718203 (+)
G100255 NA non-coding upstream 67205 2714054 ~ 2715786 (+)
G100240 NA non-coding upstream 79715 2627686 ~ 2703276 (+)
G100249 NA non-coding upstream 109930 2655631 ~ 2673061 (+)
G100268 NA non-coding downstream 1393 2785052 ~ 2785839 (+)
G100277 NA non-coding downstream 78971 2862630 ~ 2864868 (+)
G100278 NA non-coding downstream 102694 2886353 ~ 2889415 (+)
G100265 NA non-coding downstream 132944 2916603 ~ 2917428 (+)
G100282 NA non-coding downstream 135077 2918736 ~ 2973504 (+)
tekt4 LOC108436369 other upstream 132841 2642087 ~ 2650150 (+)
LOC111193505 NA other upstream 157486 2610517 ~ 2625505 (+)
LOC111193601 NA other upstream 282560 2493761 ~ 2500431 (+)
avpi1 NA other upstream 319606 2451401 ~ 2463385 (+)
LOC103026535 slc25a23a,LOC103026535,LOC107594260,LOC107703801,LOC107747161,LOC108258471 other upstream 414427 2343619 ~ 2368564 (+)
G100300 NA other downstream 260968 3044627 ~ 3046637 (+)
LOC103046164 NA other downstream 304994 3088653 ~ 3117263 (+)
G100314 NA other downstream 374997 3158656 ~ 3209330 (+)
LOC103023443 NA other downstream 443080 3226739 ~ 3229366 (+)
LOC103022119 NA other downstream 1228336 4011995 ~ 4060749 (+)

Expression


Co-expression Network