Gene
RNA
| Item | Value |
|---|---|
| gene id | G100314 |
| gene name | NA |
| gene type | unknown |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035908.1 |
| NCBI id | CM008311.1 |
| chromosome length | 31403898 |
| location | 3158656 ~ 3209330 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU135404 | True | 690 | TUCP | 0.41 | 2 | 3158656 | 3209330 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC111193603 | NA | coding | upstream | 9490 | 3143050 ~ 3149166 (+) |
| slc9a3r2 | slc9a3r2 | coding | upstream | 126941 | 3008861 ~ 3031715 (+) |
| nthl1 | nthl1 | coding | upstream | 154394 | 2997559 ~ 3004262 (+) |
| pkd1 | pkd1 | coding | upstream | 242456 | 2775158 ~ 2916200 (+) |
| exosc1 | exosc1,LOC107700859,LOC107598491 | coding | upstream | 639730 | 2508536 ~ 2518926 (+) |
| LOC103032260 | NA | coding | downstream | 2440 | 3211770 ~ 3225512 (+) |
| LOC103037697 | LOC108438607 | coding | downstream | 74428 | 3283758 ~ 3289225 (+) |
| kif16b | kif16b | coding | downstream | 172550 | 3381880 ~ 3423599 (+) |
| esf1 | esf1,LOC107579043 | coding | downstream | 227402 | 3436732 ~ 3455661 (+) |
| LOC103036342 | jag1 | coding | downstream | 367851 | 3577181 ~ 3634221 (+) |
| G100305 | NA | non-coding | upstream | 33076 | 3063953 ~ 3125580 (+) |
| G100288 | tsc2 | non-coding | upstream | 161240 | 2991418 ~ 2997416 (+) |
| G100282 | NA | non-coding | upstream | 185152 | 2918736 ~ 2973504 (+) |
| G100283 | tsc2 | non-coding | upstream | 218479 | 2926659 ~ 2940177 (+) |
| G100281 | NA | non-coding | upstream | 235189 | 2919479 ~ 2923467 (+) |
| G100377 | nup133,LOC106564728 | non-coding | downstream | 146248 | 3355578 ~ 3357876 (+) |
| G100387 | NA | non-coding | downstream | 181687 | 3391017 ~ 3394325 (+) |
| G100365 | NA | non-coding | downstream | 215359 | 3424689 ~ 3426907 (+) |
| G100363 | btbd3,btbd3a,LOC107583195,LOC107684321,LOC107675618,LOC107594463,LOC107747408 | non-coding | downstream | 226709 | 3436039 ~ 3463191 (+) |
| G100390 | NA | non-coding | downstream | 239833 | 3449163 ~ 3515506 (+) |
| LOC103046164 | NA | other | upstream | 41393 | 3088653 ~ 3117263 (+) |
| G100300 | NA | other | upstream | 112019 | 3044627 ~ 3046637 (+) |
| tekt4 | LOC108436369 | other | upstream | 508506 | 2642087 ~ 2650150 (+) |
| LOC111193505 | NA | other | upstream | 533151 | 2610517 ~ 2625505 (+) |
| LOC111193601 | NA | other | upstream | 658225 | 2493761 ~ 2500431 (+) |
| LOC103023443 | NA | other | downstream | 17409 | 3226739 ~ 3229366 (+) |
| LOC103022119 | NA | other | downstream | 802665 | 4011995 ~ 4060749 (+) |
| G100820 | akt3b,LOC108438606,LOC108259077,LOC107594289,LOC107729704,LOC107703832,LOC101071975 | other | downstream | 1040753 | 4250083 ~ 4267826 (+) |
| atg4d | atg4d | other | downstream | 1419793 | 4629123 ~ 4645356 (+) |
| G100975 | NA | other | downstream | 1877430 | 5086760 ~ 5091748 (+) |
