Gene
RNA
| Item | Value |
|---|---|
| gene id | G100317 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035908.1 |
| NCBI id | CM008311.1 |
| chromosome length | 31403898 |
| location | 3182191 ~ 3200431 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU135409 | True | 439 | lncRNA | 0.44 | 3 | 3182191 | 3200431 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC111193506 | NA | coding | upstream | 12097 | 3164646 ~ 3170094 (+) |
| LOC111193604 | NA | coding | upstream | 22657 | 3155218 ~ 3159534 (+) |
| LOC111193603 | NA | coding | upstream | 33025 | 3143050 ~ 3149166 (+) |
| slc9a3r2 | slc9a3r2 | coding | upstream | 150476 | 3008861 ~ 3031715 (+) |
| nthl1 | nthl1 | coding | upstream | 177929 | 2997559 ~ 3004262 (+) |
| LOC107197534 | NA | coding | downstream | 2416 | 3202847 ~ 3209594 (+) |
| LOC103032260 | NA | coding | downstream | 11339 | 3211770 ~ 3225512 (+) |
| LOC103037697 | LOC108438607 | coding | downstream | 83327 | 3283758 ~ 3289225 (+) |
| kif16b | kif16b | coding | downstream | 181449 | 3381880 ~ 3423599 (+) |
| esf1 | esf1,LOC107579043 | coding | downstream | 236301 | 3436732 ~ 3455661 (+) |
| G100305 | NA | non-coding | upstream | 56611 | 3063953 ~ 3125580 (+) |
| G100288 | tsc2 | non-coding | upstream | 184775 | 2991418 ~ 2997416 (+) |
| G100282 | NA | non-coding | upstream | 208687 | 2918736 ~ 2973504 (+) |
| G100283 | tsc2 | non-coding | upstream | 242014 | 2926659 ~ 2940177 (+) |
| G100281 | NA | non-coding | upstream | 258724 | 2919479 ~ 2923467 (+) |
| G100377 | nup133,LOC106564728 | non-coding | downstream | 155147 | 3355578 ~ 3357876 (+) |
| G100387 | NA | non-coding | downstream | 190586 | 3391017 ~ 3394325 (+) |
| G100365 | NA | non-coding | downstream | 224258 | 3424689 ~ 3426907 (+) |
| G100363 | btbd3,btbd3a,LOC107583195,LOC107684321,LOC107675618,LOC107594463,LOC107747408 | non-coding | downstream | 235608 | 3436039 ~ 3463191 (+) |
| G100390 | NA | non-coding | downstream | 248732 | 3449163 ~ 3515506 (+) |
| LOC103046164 | NA | other | upstream | 64928 | 3088653 ~ 3117263 (+) |
| G100300 | NA | other | upstream | 135554 | 3044627 ~ 3046637 (+) |
| tekt4 | LOC108436369 | other | upstream | 532041 | 2642087 ~ 2650150 (+) |
| LOC111193505 | NA | other | upstream | 556686 | 2610517 ~ 2625505 (+) |
| LOC111193601 | NA | other | upstream | 681760 | 2493761 ~ 2500431 (+) |
| LOC103023443 | NA | other | downstream | 26308 | 3226739 ~ 3229366 (+) |
| LOC103022119 | NA | other | downstream | 811564 | 4011995 ~ 4060749 (+) |
| G100820 | akt3b,LOC108438606,LOC108259077,LOC107594289,LOC107729704,LOC107703832,LOC101071975 | other | downstream | 1049652 | 4250083 ~ 4267826 (+) |
| atg4d | atg4d | other | downstream | 1428692 | 4629123 ~ 4645356 (+) |
| G100975 | NA | other | downstream | 1886329 | 5086760 ~ 5091748 (+) |
