G101207


Basic Information

Item Value
gene id G101207
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 5465950 ~ 5466415 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU136677
tgtgttttcttaattttctttatttgacaACGTCAGAATGTTAACACCTTCAGATGGTAAGTTTTAAATGGTCAAAAAGTACAAAATCCTTCCCCAAACGTTCAACAGAAAGACTGAAAATGGAACAAAAACTAGGCAAAATGTCAGTGCACGGGACTACCGACTCACAGACAGCATCATCAGAGGAGGTACAGGGAGCAGGGGAAGAGTTAATGTTGGGAATCTCTGTCTGAGGCTCGTAAACAGCAGAAAAAGGACACCAGGGTGACCAAGATTAACAAGAGCTCAGTGACTAGCGTTAAGTGCTTCAGTAGTGCCCCTCTGTATCGGAGTTACTGCTTGGAGAAGTACTTCTTGCTCTCCTGAACACCAGGGATGATGGTGTCCTTCCCAGGCTCCCAGTTAGCAGGGCagactgcagaaaaaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136677 True 429 lncRNA 0.45 2 5465950 5466415

Neighbor

gene id symbol gene type direction distance location
LOC103031288 NA coding upstream 8493 5454692 ~ 5457457 (+)
rad23a rad23a coding upstream 394808 5060535 ~ 5071142 (+)
LOC103026170 NA coding upstream 661403 4796254 ~ 4804547 (+)
LOC103042234 meis1,LOC107757034 coding upstream 679065 4730629 ~ 4786885 (+)
LOC103025559 actr2,LOC108423375,LOC108441254,LOC104930021,LOC106585927,LOC107583198 coding upstream 794614 4648447 ~ 4671336 (+)
rnaseh2a rnaseh2a,LOC107747423 coding downstream 11120 5477535 ~ 5486445 (+)
snrpb2 snrpb2,LOC107684252,LOC107676294 coding downstream 21047 5487462 ~ 5493881 (+)
LOC103027484 LOC108441199,LOC108258526 coding downstream 51658 5518073 ~ 5527443 (+)
fbxo48 fbxo48,LOC107684254 coding downstream 120874 5587289 ~ 5590899 (+)
cenpk cenpk coding downstream 195401 5661816 ~ 5669700 (+)
G101186 NA non-coding upstream 101603 5363866 ~ 5364347 (+)
G101167 NA non-coding upstream 182107 5279027 ~ 5283843 (+)
G101020 NA non-coding upstream 188459 5277264 ~ 5277491 (+)
G101007 NA non-coding upstream 288810 5173943 ~ 5177140 (+)
G100974 NA non-coding upstream 382145 5081767 ~ 5083805 (+)
G101232 NA non-coding downstream 47968 5514383 ~ 5514689 (+)
G101245 NA non-coding downstream 79000 5545415 ~ 5546545 (+)
G101247 NA non-coding downstream 93442 5559857 ~ 5567450 (+)
LOC111193477 NA non-coding downstream 153631 5620046 ~ 5620854 (+)
G101272 NA non-coding downstream 158678 5625093 ~ 5627363 (+)
G100975 NA other upstream 374202 5086760 ~ 5091748 (+)
atg4d atg4d other upstream 820594 4629123 ~ 4645356 (+)
G100820 akt3b,LOC108438606,LOC108259077,LOC107594289,LOC107729704,LOC107703832,LOC101071975 other upstream 1198124 4250083 ~ 4267826 (+)
LOC103022119 NA other upstream 1405201 4011995 ~ 4060749 (+)
LOC103023443 NA other upstream 2236584 3226739 ~ 3229366 (+)
G101452 NA other downstream 815610 6282025 ~ 6407811 (+)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other downstream 833699 6300114 ~ 6302702 (+)
LOC103032856 march9,LOC108435943 other downstream 1488904 6955319 ~ 6997446 (+)
G101622 zc3h13 other downstream 1678387 7144802 ~ 7146340 (+)
LOC103042156 NA other downstream 1918342 7384757 ~ 7393225 (+)

Expression


Co-expression Network