G101455


Basic Information

Item Value
gene id G101455
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 6338045 ~ 6348295 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU136983
tgtCGTTCTTAATCTGACGACTCTTGGCCTCCCTTAAAGGGAAGCCTTGGGCTAGCTTAAAATAGACTCTTAAAGATtatctagtcatgcatcactacaaaagttttaaattcaaaagaaagaagataaaCATCAGACGAGTGCCTTGAgttaaagaaaggagaagacgaGTCGTTCCGAAGTTCTAAGTTAATCTTTTATTGTcttgaagtcagccagattcAGTCAGAAGGATTCAGTCTTCTGATAACACACAGGAATACATGCTCTTTTATACAGTATCTGGGTGAACAACGGTGGGGGCTTTTGGCACACCTGTCCTTCACTTGGGCACTCTTCTCGTGAGAGAAAGCTGACCTTGAGCAACGTCTGGGCTTTTTCAGCTGAAGTCAGACAAAACCCAAGGTCGCCTCGACCAGCACCTCACGCCTTGGTACAGACTGTACAGGCCTCAGAGAAAGGGTCAGACACCTGTTTTAACAGAACTTAGTGAACTCTAGACTTTTTTTCCAAGTATACTATTATAAAGGTAATATAGCATATATTGATCACCAATTTAGGGCCCAcaccagccccctgtccagtctcagccccgtgtccagccctgtgtcctgtcccctgtccagtcccagtctccgttccctgtccagtctccgtctcctgttcggtcccctgtccagtcccagtctccgttccctttccagtctccgtctcctgttcggtcccctgtccagtcccagtctcctgtccagtcccctgttcagCCATG

Function

GO:

id name namespace
GO:0031667 response to nutrient levels biological_process
GO:0009991 response to extracellular stimulus biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136983 True 769 lncRNA 0.48 3 6338045 6348295

Neighbor

gene id symbol gene type direction distance location
dis3 dis3 coding upstream 57934 6257549 ~ 6280111 (+)
LOC103034899 LOC103034899,LOC108441992 coding upstream 119559 6214049 ~ 6218486 (+)
LOC103030021 LOC108441987,LOC108258654 coding upstream 236724 6050850 ~ 6101321 (+)
LOC103029379 kcnq5,LOC108441989,LOC100711684,LOC102297355,LOC103148493 coding upstream 318086 5808438 ~ 6019959 (+)
LOC103029074 NA coding upstream 542617 5677586 ~ 5795428 (+)
LOC103031289 dachc,LOC108435962,LOC108259061,LOC107732708,LOC107602747 coding downstream 2954 6351249 ~ 6462585 (+)
LOC103025984 ubac2 coding downstream 136042 6484337 ~ 6501618 (+)
LOC111193520 NA coding downstream 164169 6512464 ~ 6513258 (+)
LOC103031597 ubac2 coding downstream 173019 6521314 ~ 6529313 (+)
LOC103036567 LOC108435966 coding downstream 190052 6538347 ~ 6548346 (+)
G101459 NA non-coding upstream 24105 6312903 ~ 6313940 (+)
G101454 bora,LOC107556689 non-coding upstream 41138 6289342 ~ 6296907 (+)
G101444 metap1d,LOC107704334 non-coding upstream 104626 6229203 ~ 6233419 (+)
G101440 NA non-coding upstream 117094 6220527 ~ 6220951 (+)
G101426 NA non-coding upstream 232823 6101549 ~ 6105222 (+)
G101466 NA non-coding downstream 24462 6372757 ~ 6373297 (+)
G101472 NA non-coding downstream 145674 6493969 ~ 6566181 (+)
G101483 NA non-coding downstream 181456 6529751 ~ 6536902 (+)
G101485 NA non-coding downstream 183708 6532003 ~ 6533758 (+)
G101490 NA non-coding downstream 230962 6579257 ~ 6627008 (+)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other upstream 35343 6300114 ~ 6302702 (+)
G100975 NA other upstream 1246297 5086760 ~ 5091748 (+)
atg4d atg4d other upstream 1692689 4629123 ~ 4645356 (+)
G100820 akt3b,LOC108438606,LOC108259077,LOC107594289,LOC107729704,LOC107703832,LOC101071975 other upstream 2070219 4250083 ~ 4267826 (+)
LOC103022119 NA other upstream 2277296 4011995 ~ 4060749 (+)
LOC103032856 march9,LOC108435943 other downstream 607024 6955319 ~ 6997446 (+)
G101622 zc3h13 other downstream 796507 7144802 ~ 7146340 (+)
LOC103042156 NA other downstream 1036462 7384757 ~ 7393225 (+)
G102015 NA other downstream 2366544 8714839 ~ 8719235 (+)
LOC103025691 NA other downstream 2449450 8797745 ~ 8836081 (+)

Expression


Co-expression Network