G101485


Basic Information

Item Value
gene id G101485
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 6532003 ~ 6533758 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU137022
tgctaagtggttgctaggcagttgctaacgtattccacatggttgctaagtggttgctaggcagttgctaacattttccaggtggttgctaagatgttgttcagtggttgctaggcagttgctatgatttctaaagtggttgctaggcagttgctaacgttttcctagtggttgctaaggtgttgctaagcggttgctatgcagttgctatcatttcgaaagtggttgctaagtggttgctaggcagttgctaacgttttcttagtggttgctaaggtgttgctaagtggttgctaggcagttgctatcgtttctaaagtggttgctaagtggttgctaggcagttgctaaccttttccaggtggttgctaagtggttgctaggcagttgctaacattttccaggtggttgctaa

Function

NR:

description
PREDICTED: inositol polyphosphate 5-phosphatase OCRL-1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137022 True 415 lncRNA 0.45 3 6532003 6533758

Neighbor

gene id symbol gene type direction distance location
LOC103031597 ubac2 coding upstream 2690 6521314 ~ 6529313 (+)
LOC111193520 NA coding upstream 18745 6512464 ~ 6513258 (+)
LOC103025984 ubac2 coding upstream 30385 6484337 ~ 6501618 (+)
LOC103031289 dachc,LOC108435962,LOC108259061,LOC107732708,LOC107602747 coding upstream 69418 6351249 ~ 6462585 (+)
dis3 dis3 coding upstream 251892 6257549 ~ 6280111 (+)
LOC103036567 LOC108435966 coding downstream 4589 6538347 ~ 6548346 (+)
igf2bp2 igf2bp2,LOC108435967,LOC105911772,LOC107749880,LOC107704342 coding downstream 20053 6553811 ~ 6633366 (+)
LOC103037816 cunh3orf70,LOC108435969,LOC107556711,LOC105912663,LOC102778299 coding downstream 158517 6692275 ~ 6733982 (+)
alg11 alg11,LOC107556718 coding downstream 642770 7176528 ~ 7183893 (+)
spp2 NA coding downstream 656566 7190324 ~ 7196997 (+)
G101466 NA non-coding upstream 158706 6372757 ~ 6373297 (+)
G101455 NA non-coding upstream 183708 6338045 ~ 6348295 (+)
G101462 NA non-coding upstream 184870 6346557 ~ 6347133 (+)
G101459 NA non-coding upstream 218063 6312903 ~ 6313940 (+)
G101454 bora,LOC107556689 non-coding upstream 235096 6289342 ~ 6296907 (+)
G101490 NA non-coding downstream 45499 6579257 ~ 6627008 (+)
G101583 NA non-coding downstream 154527 6688285 ~ 6688632 (+)
G101610 NA non-coding downstream 464332 6998090 ~ 7013954 (+)
G101609 NA non-coding downstream 465328 6999086 ~ 7094070 (+)
G101626 NA non-coding downstream 560789 7094547 ~ 7120309 (+)
G101452 NA other upstream 124192 6282025 ~ 6407811 (+)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other upstream 229301 6300114 ~ 6302702 (+)
G100975 NA other upstream 1440255 5086760 ~ 5091748 (+)
atg4d atg4d other upstream 1886647 4629123 ~ 4645356 (+)
G100820 akt3b,LOC108438606,LOC108259077,LOC107594289,LOC107729704,LOC107703832,LOC101071975 other upstream 2264177 4250083 ~ 4267826 (+)
LOC103032856 march9,LOC108435943 other downstream 421561 6955319 ~ 6997446 (+)
G101622 zc3h13 other downstream 611044 7144802 ~ 7146340 (+)
LOC103042156 NA other downstream 850999 7384757 ~ 7393225 (+)
G102015 NA other downstream 2181081 8714839 ~ 8719235 (+)
LOC103025691 NA other downstream 2263987 8797745 ~ 8836081 (+)

Expression


Co-expression Network