G101622 (zc3h13)


Basic Information

Item Value
gene id G101622
gene name zc3h13
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 7144802 ~ 7146340 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU137208
AGGCTGTCCACTTTCTCTGTCTCGCAGGGCTCGATCTGTGTGTGCAGTTCATCTGTAGTGCTGGGTTTATCTGCATCCATAAGAGCTTCTCTGGGCAGGAGAGGCTCATAGTCTCCCCGTTCTGTCCTCATATCCGCTCTGCTCTTGGGTTCCCCCAGTGGTGGGAAGTCAAACGGCAGCATCCGTTCCCGATCCCCTCTTTCCCGCTCTCTCTCGCGGTCTCTGTCCCGTTCTCGCTCCCTCTCCCCGCGGTCTCGATCCAGGCGTTCGTGTGGCAGCAGTCCCTCAGGCAGCATCCGCTCCCTCTCACGCATCTCTCTCAGGTCCCGCTCTCTGATTGGCTCCCGATTGCCACGGAGGAGGAGTGGCTCCCGTCCACGGACAGGCCACTCGCGCGGCTCCGGCTCCCATTCACGCTGCTGCCCGGGCATTGGCTGATTCGGTGGCTGTCTGTGGTCCTTCCTGTCCCTCTCGAACTGATCCCGCTCGCGCTCGCGGCTGTCGTAGGAGCCTGCACGAGAGCGGCCCTGTCGCTCTGACTCTGGAGAGCTGCGTCTCGAGCTGTGGCTGCGCGAGTCGGTTCTCCCCTCCTCAGCTGGTCAATCCTCGACTTCCTCTCTCCTCCCATCGTCTCgttcactgctgctgctgctgctgctctctccctctcgcgctccctctctctctccctttcccgctccctctctctgtcccgGTCGCGAGAGTTGCCTCCGTGCATGCGGCCTCTACGTGAGCGCACTCCAGGCTGCCCCTCATCTACACGGTGGGCGGAGTCACTGGAGGGGGACCGGAGCCTGCGGGAGGATGCCCGGCTCTGGTTGCTGCCCATGCTGCCACTGCGCTGCTGCTGCATTggttgttgttgctgctgctgggaGTCCTGTGGCTTACGCAGCATGTGCTGGGGCAGGAGAGGCTGCAGGGGTAATGCCTGCATCAGCATGGGTGGGTCCGGAAGTAAGGGGGCGATGTTTCGCCCTCGTCTGGGGGGCAGCTCGGCAGGGAGCAGCCGCTCTGGAGGTCGCTCACCTGTAGGAATGGA

Function

symbol description
zc3h13 Predicted to enable metal ion binding activity. Orthologous to human ZC3H13 (zinc finger CCCH-type containing 13).

NR:

description
PREDICTED: zinc finger CCCH domain-containing protein 13 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137208 True 1063 TUCP 0.63 2 7144802 7146340

Neighbor

gene id symbol gene type direction distance location
LOC103037816 cunh3orf70,LOC108435969,LOC107556711,LOC105912663,LOC102778299 coding upstream 410820 6692275 ~ 6733982 (+)
igf2bp2 igf2bp2,LOC108435967,LOC105911772,LOC107749880,LOC107704342 coding upstream 511436 6553811 ~ 6633366 (+)
LOC103036567 LOC108435966 coding upstream 596456 6538347 ~ 6548346 (+)
LOC103031597 ubac2 coding upstream 615489 6521314 ~ 6529313 (+)
LOC111193520 NA coding upstream 631544 6512464 ~ 6513258 (+)
alg11 alg11,LOC107556718 coding downstream 30188 7176528 ~ 7183893 (+)
spp2 NA coding downstream 43984 7190324 ~ 7196997 (+)
LOC103040632 LOC108435946,LOC107747441,LOC107676094 coding downstream 126218 7272558 ~ 7281839 (+)
pld6 pld6,LOC107583251 coding downstream 139152 7285492 ~ 7289120 (+)
LOC103040938 rab3da,LOC103040938,LOC108435977,LOC108258507,LOC107757002,LOC107747429,LOC107675349,LOC107569532 coding downstream 147945 7294285 ~ 7318919 (+)
G101626 NA non-coding upstream 24493 7094547 ~ 7120309 (+)
G101620 NA non-coding upstream 24821 7118866 ~ 7119981 (+)
G101609 NA non-coding upstream 50732 6999086 ~ 7094070 (+)
G101610 NA non-coding upstream 130848 6998090 ~ 7013954 (+)
G101583 NA non-coding upstream 456170 6688285 ~ 6688632 (+)
G101636 NA non-coding downstream 28325 7174665 ~ 7174889 (+)
G101656 NA non-coding downstream 123466 7269806 ~ 7270143 (+)
G101674 NA non-coding downstream 222935 7369275 ~ 7369582 (+)
G101676 NA non-coding downstream 224731 7371071 ~ 7371397 (+)
G101679 LOC107655627,LOC107559781,LOC108256914,LOC108437766,LOC105901645 non-coding downstream 231922 7378262 ~ 7382475 (+)
LOC103032856 march9,LOC108435943 other upstream 147356 6955319 ~ 6997446 (+)
G101452 NA other upstream 736991 6282025 ~ 6407811 (+)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other upstream 842100 6300114 ~ 6302702 (+)
G100975 NA other upstream 2053054 5086760 ~ 5091748 (+)
atg4d atg4d other upstream 2499446 4629123 ~ 4645356 (+)
LOC103042156 NA other downstream 238417 7384757 ~ 7393225 (+)
G102015 NA other downstream 1568499 8714839 ~ 8719235 (+)
LOC103025691 NA other downstream 1651405 8797745 ~ 8836081 (+)
trnar-ucu_1 NA other downstream 1687500 8833840 ~ 8833931 (+)
G102411 LOC107747660 other downstream 3379337 10525677 ~ 10526160 (+)

Expression


Co-expression Network