G102015


Basic Information

Item Value
gene id G102015
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 8714839 ~ 8719235 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU137786
TCGCAGGCAGCAGATCACGTTATTAAGAGcaataaaaaattaatctgATGTTCATGTTTTTCTGTCCCCAGCCCACCCTCTGTAACCcccactccaacacacacacacattaaaaaaggaCACAACAGCCGAATTAACACAAGTTTCACTggcttccttttttttcttgtttttaatcatttcaaTCAGAGCATCCAACCAGCAGCgatttcattttctatttaaGAGCTGAAGATGATTTACACACACTTCACCAACACTCCActcagatacagagagagagagagagagagagagagagagagatgaggggCAAAGGAAGAACAGTATGACAAAGAGAGAtatacaaaaagataaaataggaagatggaaaaagagaaagaggagagagagtgattcacacaaaattaaatgggaagagaaagaaaagaaaaaagagagatacatGCAAAGAATAGAGAGACATAGCCATTCACATAGCcataaaaaatcagatctgagccacattgagcaaaaatcCGATTTGaatcactttagcctggtaatgtaaacaTAGCCTTAGAGTATGGGTGGCCAAACTTTTGAACACGAAGAGTATTATTACTACCTGGAGCAACAGGTTATGAACAACTTTTCAAAAATTCCCCTTCACTGTATGGCTTTTTAGCATGAGCAATATTCCAAGCCATCTGACAGGAGGCAAGCGTGACCATTTATGACCTGTTTTGTTAGCTTCTGAAACTGTCAGGTTccaacccccgctcatgcagctttgccatcaagatgccggcgctcagagggatcAAAATtgggccctgctccctccgggtgggtagatggcgctctctccccacatcactcctagggtgatgtcgaacagcacagggcgtctgtgagctgatgtatcagaaccgagtcgctgcgctttcctccaaatgcgctgtgatgctactcagtaatgctgcatcagcagcagctcgaaaagaagcggaggctgacttcacatgtatcggaggaagcatgtgctagtcttcacactcctggtgtgttggggcatctctagtgatagggggagtcttagtgagtgggttgggaaattggctgtgtaaattagggagaaaatgggcaaaattagaaatatatatatatatatatatatatatatatatatatatatatatatatataaaaaggaaCAGGCAAGAGCCGCATGTGGCCACCCCTGCCTTAGAGTACACCAGTTTACTTTCTTTTTACACAGCATTGGAATCCAAATCTTCCCTCTGAGTGCAACTATTTACTTGATGATGagttttgttcttgtttttggtCAAATCTGTCACAtggtcactttttttttgttttaaacacaataaacacacacatacacacatacagaacaCAGTAATATAATATCTGACACAAACACAGGAGAATTTGTTCTCTGCAGATCAAAGGAGCACTTTGAGGAAGGAGGTCTGATGCTGCATTCCAGGAATTCGACAGAAGACACTTTGAAGAGAGCGTTAGTGGATCatcagtagtagcagcagcagcttcttcTTCTACAAAACTACAACAGTCCTTTAATCACTCGAGTCTATTCGCTTCTCATTGGTCTCTTCTTTAAGCAGCACTCGTCATTCATTCGTCCAACAGAATCAGTCAGGTTTGGGCAATCGGAGCAGACGCTGGGTGTGGGTGGATGAAGGCGTTTGAAGTATTAGACTACAGGTATACTTGCTGTAGTATTTGTTCGGCTATACATTTATGTATATGATCCATAATCCATAATccataatttctggtatttgcttatttttgctcgtattttatcctcttcagtcaCAAAGATGCCATAAAGTATTGTTGAGAACTGTTGTgcgatatacaggggttggacaatgaaactgaaacacctggttttagaccacaataaattattgtcctGATGGACAGCTCTGGGGGACACAGGAGAgttgaacatccctttcagacagcttcctcttacagcgtccacagttaatcctgttgcatgtggttcttggtggtatgctgacattaccctggataccgtggctcttgatgcatcacaaagacttactGTCTTGGTCGcagatgcggcagcaagacgtgcaccaataatttgtgtgcattgcaatattttgagcagaactgtgctcttaccctgctaattgaaccttcacactctgctcttactggcgcaataatgtgcaattaatgaagactgaccaccaggctgctccaatttagccatgaaacctctcgCACTataatgacaggtgtttcagtttcattgtccaacccctgtatatcgaGCATCACAGAATTACAGACTGGCGTCTGGCTAAAACTGTCCATGCGAACAGGCGACACTTAAAAATTGAAACTCAAGGCATTCTGTTTCTTTAGTTTATCACATACTTAATGATCGAACAGTTTATCAGTTATACGTCCAATTGCTTTTAAGCCTTTAAAAATGGAGGGAAATGTGCAAATGTTTAAATGGCTAAGATTCCTAAAAGGTAAATTCAATGTTTGCTGGTGTAAAGAggcacaaattacacacacacaaagaaaactgtcACTGTATGAACACTTATGGACCTTAATGTATCAGTCGTAAATAATCTAAGAACCTGATTTTCTCGCTAAACCTCTTAGGAATCAAAAATCCCATGTCTCAGCTTTTAAAAACCATTTTTCAAGAGAGAACCAAAGCCCTCAAACCCTCAAACACTCTGAAAATTCTTTGCACAGAGCACATACTTCAGACGCTCCATCACACCCAGACCTGTGGTTAAGAGCAAGATTGAAACGACAACatagaagtagaagaagaagaagaagaagaagaagaagaagaataatcaCGAAGAATCGTGGTTAAAAAGTTGGCTTAGTGCAGATCATCAGTCTGAATCACAGTCAAATTCGATTTGATTCGTTTGATTCGCCTAGCTTAACACAGTTCTCATTCGTCACTTGttacaattaatatatattaaattttacCATTCTTAGTCTTAAAATACCTTTTTTGTTCTGCTAAAATCTCGCTACTATACTTATAGGCATCATTCATCATTCACTTGTAGGTAGGCAATCAATCAAGACACCCCATGACGTGGTCACCCCACGTCGTTGTGCGTACGTCTACGATTAAAGAAGGAGCAACGGCTGCTTCTTTTctcccgcaaaaaaaaaaacctcccaCGAAAATTAGCACTGAATCAGGCATGAAAGATGAAAATGTGGGCGTCATGAGATCAGGCTTTCCGCCGGCCCGAATGCGAAGCTCCAGCTGCCGTTCTCCGGGTTCCTCAGGCCTTTTGAAGCCCCACCAGAGCGCAGCTCTGCTTCCACAGCCGGCCCTGCAGCTGCTCGTCGTAGGAGGTCACCGAGGACTCGGTCTTGCGGCCGTTGTACAGATACAGCCCCCCGACCCCCTCCAGCTCGGAGGCAGCTGCGGCGTAGATGGCCGTGGAGGCTCCTTCAGCCGGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137786 True 3526 TUCP 0.42 3 8714839 8719235

Neighbor

gene id symbol gene type direction distance location
LOC111193523 NA coding upstream 28319 8684904 ~ 8686520 (+)
LOC103024012 creb1a,LOC107757658,LOC107714305,LOC108437762,LOC107552236,LOC107691602 coding upstream 50331 8650120 ~ 8664508 (+)
LOC103023156 NA coding upstream 171275 8540994 ~ 8543564 (+)
LOC103034778 LOC108437774 coding upstream 944311 7709299 ~ 7770528 (+)
LOC103044305 NA coding upstream 1153912 7542340 ~ 7560927 (+)
LOC103036357 NA coding downstream 120839 8840074 ~ 8851853 (+)
serhl2 NA coding downstream 372925 9092160 ~ 9105524 (+)
LOC111193613 NA coding downstream 397280 9116515 ~ 9119412 (+)
sept3 sept3,LOC107551931 coding downstream 401282 9120517 ~ 9136341 (+)
atf7ip LOC106589307 coding downstream 432615 9151850 ~ 9212095 (+)
G102014 NA non-coding upstream 7962 8706418 ~ 8706877 (+)
G102004 NA non-coding upstream 96447 8618171 ~ 8618392 (+)
G101974 NA non-coding upstream 175122 8539482 ~ 8539717 (+)
G101954 NA non-coding upstream 297218 8417197 ~ 8417621 (+)
G101949 NA non-coding upstream 364141 8350429 ~ 8350698 (+)
G102081 mxra5 non-coding downstream 139363 8858598 ~ 8863829 (+)
G102088 NA non-coding downstream 195159 8914394 ~ 8914600 (+)
G102098 NA non-coding downstream 379517 9098752 ~ 9101093 (+)
LOC111193524 NA non-coding downstream 391655 9110890 ~ 9115477 (+)
G102105 NA non-coding downstream 423532 9142767 ~ 9143997 (+)
LOC103042156 NA other upstream 1321614 7384757 ~ 7393225 (+)
G101622 zc3h13 other upstream 1568499 7144802 ~ 7146340 (+)
LOC103032856 march9,LOC108435943 other upstream 1717393 6955319 ~ 6997446 (+)
G101452 NA other upstream 2307028 6282025 ~ 6407811 (+)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other upstream 2412137 6300114 ~ 6302702 (+)
LOC103025691 NA other downstream 78510 8797745 ~ 8836081 (+)
trnar-ucu_1 NA other downstream 114605 8833840 ~ 8833931 (+)
G102411 LOC107747660 other downstream 1806442 10525677 ~ 10526160 (+)
LOC111193528 NA other downstream 2149342 10868577 ~ 10870156 (+)
map2k7 map2k7,LOC107676852,LOC107712243 other downstream 2555511 11274746 ~ 11294815 (+)

Expression


Co-expression Network