G103023


Basic Information

Item Value
gene id G103023
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 12626199 ~ 12740168 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU139239
gtgtctgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtctgtggtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtCTGGGTGTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139239 True 236 lncRNA 0.50 3 12626199 12740168

Neighbor

gene id symbol gene type direction distance location
LOC103025394 NA coding upstream 65088 12546334 ~ 12561111 (+)
cbr1 cbr1,LOC108428204,LOC107746284,LOC107692178 coding upstream 86633 12535280 ~ 12539566 (+)
LOC103032463 NA coding upstream 247237 12357030 ~ 12378962 (+)
arl11 NA coding upstream 567745 12056110 ~ 12058454 (+)
LOC111193615 mcf2l coding upstream 629472 11986919 ~ 11996727 (+)
LOC103027506 gja8,LOC108258942,LOC107603011,LOC107566539,LOC107746070 coding downstream 22098 12762266 ~ 12767170 (+)
LOC103028151 fstl1,LOC103028151,LOC108428196,LOC108258944,LOC106575075,LOC105019681 coding downstream 45590 12785758 ~ 12815661 (+)
LOC103028459 LOC108428195,LOC108258943,LOC107566531,LOC107710590 coding downstream 78018 12818186 ~ 12833144 (+)
stn1 obfc1 coding downstream 96991 12837159 ~ 12846645 (+)
cfap58 NA coding downstream 485133 13225301 ~ 13429937 (+)
G102917 NA non-coding upstream 203382 12416419 ~ 12422817 (+)
G102916 NA non-coding upstream 211226 12414166 ~ 12414973 (+)
G102902 NA non-coding upstream 223945 12379091 ~ 12402254 (+)
G102907 NA non-coding upstream 257925 12366250 ~ 12368274 (+)
G102901 pdxkb,LOC108428208,LOC103021965,LOC102792432,LOC106527750,LOC107376125,LOC108247466,LOC107676865 non-coding upstream 302615 12319012 ~ 12323584 (+)
G103067 NA non-coding downstream 27048 12767216 ~ 12783303 (+)
G103068 NA non-coding downstream 35086 12775254 ~ 12782304 (+)
LOC111193478 NA non-coding downstream 41431 12781599 ~ 12783058 (+)
G103086 NA non-coding downstream 77090 12817258 ~ 12817489 (+)
G103102 NA non-coding downstream 278680 13018848 ~ 13019168 (+)
cryzl1 cryzl1 other upstream 103896 12483622 ~ 12522303 (+)
cab39l cab39l,LOC107676861,LOC107718429 other upstream 601435 12000639 ~ 12024764 (+)
map2k7 map2k7,LOC107676852,LOC107712243 other upstream 1331384 11274746 ~ 11294815 (+)
LOC111193528 NA other upstream 1756043 10868577 ~ 10870156 (+)
G102411 LOC107747660 other upstream 2100039 10525677 ~ 10526160 (+)
sh3pxd2a sh3pxd2a other downstream 110833 12851001 ~ 13032506 (+)
G103376 zgc:77880,LOC108439367,LOC107692630,LOC107723165,LOC103363053,LOC107758853,LOC105904859,LOC107590776 other downstream 1188897 13929065 ~ 13935667 (+)
G103490 LOC106510829 other downstream 1520457 14260625 ~ 14261539 (+)
G103551 NA other downstream 1878467 14618635 ~ 14619082 (+)
G103561 NA other downstream 1950875 14691043 ~ 14692199 (+)

Expression


Co-expression Network