G103102


Basic Information

Item Value
gene id G103102
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 13018848 ~ 13019168 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU139336
cccatttttctccccaatttacacggccaattacccaacccactcattaggactccccctatcactagtaatgccacaacacaccaggagggcaaagactaacacatgcttcctccgatacatgtgaagccagccaccgcttcttttcgagctgctgccgatgcagcattgccgagcagccaccgcgcttggaggaaagcacagcggctcagctccggtacatcagctcacagacgccctgtgctgcagacattaccctaggagtgatgtggggagagagcgccatctacccacccagagggagcagggccaattgtgctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139336 True 321 lncRNA 0.56 1 13018848 13019168

Neighbor

gene id symbol gene type direction distance location
stn1 obfc1 coding upstream 172203 12837159 ~ 12846645 (+)
LOC103028459 LOC108428195,LOC108258943,LOC107566531,LOC107710590 coding upstream 185704 12818186 ~ 12833144 (+)
LOC103028151 fstl1,LOC103028151,LOC108428196,LOC108258944,LOC106575075,LOC105019681 coding upstream 203187 12785758 ~ 12815661 (+)
LOC103027506 gja8,LOC108258942,LOC107603011,LOC107566539,LOC107746070 coding upstream 251678 12762266 ~ 12767170 (+)
bcl9 bcl9,LOC107676875,LOC107746055,LOC107746285 coding upstream 285651 12568579 ~ 12733197 (+)
cfap58 NA coding downstream 206133 13225301 ~ 13429937 (+)
LOC103043054 NA coding downstream 560959 13580127 ~ 13590984 (+)
LOC103024001 LOC108439370,LOC108258974,LOC107758869,LOC107590749 coding downstream 611449 13630617 ~ 13665746 (+)
LOC103023667 LOC108439371 coding downstream 654130 13673298 ~ 13676357 (+)
LOC103023349 LOC108439383,LOC108258976 coding downstream 657276 13676444 ~ 13680221 (+)
G103086 NA non-coding upstream 201359 12817258 ~ 12817489 (+)
G103067 NA non-coding upstream 235545 12767216 ~ 12783303 (+)
LOC111193478 NA non-coding upstream 235790 12781599 ~ 12783058 (+)
G103068 NA non-coding upstream 236544 12775254 ~ 12782304 (+)
G103023 NA non-coding upstream 278680 12626199 ~ 12740168 (+)
G103130 NA non-coding downstream 15063 13034231 ~ 13034919 (+)
G103133 neurl1,neurl1aa,LOC107676877 non-coding downstream 21472 13040640 ~ 13045883 (+)
G103163 NA non-coding downstream 193229 13212397 ~ 13214646 (+)
G103169 NA non-coding downstream 206313 13225481 ~ 13225718 (+)
G103178 NA non-coding downstream 342435 13361603 ~ 13362004 (+)
cryzl1 cryzl1 other upstream 496545 12483622 ~ 12522303 (+)
cab39l cab39l,LOC107676861,LOC107718429 other upstream 994084 12000639 ~ 12024764 (+)
map2k7 map2k7,LOC107676852,LOC107712243 other upstream 1724033 11274746 ~ 11294815 (+)
LOC111193528 NA other upstream 2148692 10868577 ~ 10870156 (+)
G102411 LOC107747660 other upstream 2492688 10525677 ~ 10526160 (+)
G103376 zgc:77880,LOC108439367,LOC107692630,LOC107723165,LOC103363053,LOC107758853,LOC105904859,LOC107590776 other downstream 909897 13929065 ~ 13935667 (+)
G103490 LOC106510829 other downstream 1241457 14260625 ~ 14261539 (+)
G103551 NA other downstream 1599467 14618635 ~ 14619082 (+)
G103561 NA other downstream 1671875 14691043 ~ 14692199 (+)
LOC103032764 LOC108443686,LOC108258285,LOC107746061,LOC107684317,LOC107566138,LOC105891017,LOC107690754,LOC107086972 other downstream 1980287 14999455 ~ 15297939 (+)

Expression


Co-expression Network