Gene
RNA
| Item | Value |
|---|---|
| gene id | G53002 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 4359587 ~ 4479642 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU60366 | False | 527 | lncRNA | 0.44 | 2 | 4359587 | 4441120 |
| TU60367 | True | 538 | lncRNA | 0.48 | 3 | 4359587 | 4479642 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_04196309_04197268 | DNAJC28 | coding | downstream | 162319 | 4196309 ~ 4197268 (-) |
| CI01000009_04069741_04071278 | NA | coding | downstream | 287983 | 4069714 ~ 4071604 (-) |
| CI01000009_04015167_04016764 | NA | coding | downstream | 342750 | 4015005 ~ 4016837 (-) |
| CI01000009_03791699_03858262 | NCAM2 | coding | downstream | 500353 | 3790698 ~ 3859234 (-) |
| CI01000009_03770045_03770497 | NA | coding | downstream | 589090 | 3769910 ~ 3770497 (-) |
| CI01000009_04738315_04741396 | RALB.S, RALBA, RALB.L, RALB | coding | upstream | 258587 | 4738229 ~ 4742426 (-) |
| CI01000009_04778332_04780190 | NA | coding | upstream | 298411 | 4778053 ~ 4786216 (-) |
| CI01000009_04888729_04895882 | NA | coding | upstream | 408555 | 4888197 ~ 4896479 (-) |
| CI01000009_04976520_04987680 | NA | coding | upstream | 496844 | 4976486 ~ 4987707 (-) |
| CI01000009_05046374_05094978 | SEMA5B, SEMA5BA | coding | upstream | 566658 | 5046300 ~ 5095973 (-) |
| G52995 | NA | non-coding | downstream | 31902 | 4327486 ~ 4327685 (-) |
| G52878 | NA | non-coding | downstream | 77782 | 4281345 ~ 4281805 (-) |
| G52831 | NA | non-coding | downstream | 252217 | 4107147 ~ 4107370 (-) |
| G52773 | NA | non-coding | downstream | 295926 | 4063231 ~ 4063661 (-) |
| G52770 | NA | non-coding | downstream | 311326 | 4047823 ~ 4048261 (-) |
| G53048 | NA | non-coding | upstream | 56 | 4479698 ~ 4512678 (-) |
| G53055 | NA | non-coding | upstream | 35239 | 4514881 ~ 4539189 (-) |
| G53068 | NA | non-coding | upstream | 67349 | 4546991 ~ 4557556 (-) |
| G53081 | NA | non-coding | upstream | 110332 | 4589974 ~ 4596305 (-) |
| G53088 | NA | non-coding | upstream | 126916 | 4606558 ~ 4609919 (-) |
| G52828 | NA | other | downstream | 128118 | 4217420 ~ 4231469 (-) |
| CI01000009_03261739_03262843 | NA | other | downstream | 1097630 | 3261038 ~ 3262843 (-) |
| CI01000009_02885473_02893975 | NA | other | downstream | 1460180 | 2883688 ~ 2893975 (-) |
| G52410 | NA | other | downstream | 1797054 | 2551724 ~ 2562533 (-) |
| G53515 | NA | other | upstream | 1022753 | 5502395 ~ 5505248 (-) |
| G55814 | NA | other | upstream | 3946179 | 8425821 ~ 8428012 (-) |
| CI01000009_08858198_08860555 | NA | other | upstream | 4378510 | 8856310 ~ 8860563 (-) |
| G59097 | NA | other | upstream | 7808575 | 12288217 ~ 12289518 (-) |
| CI01000009_13975122_13976026 | NA | other | upstream | 9495746 | 13975099 ~ 13978614 (-) |
