G103376 (zgc:77880,LOC108439367,LOC107692630,LOC107723165,LOC103363053,LOC107758853,LOC105904859,LOC107590776)


Basic Information

Item Value
gene id G103376
gene name zgc:77880,LOC108439367,LOC107692630,LOC107723165,LOC103363053,LOC107758853,LOC105904859,LOC107590776
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 13929065 ~ 13935667 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU139745
AGTCGGGGAGGTAAAGATGGCGTCGTTTCGCTGCCGGCGGGACCCGTGCGGGTTTATCTGCCTGATTCTGACCTATTTCAGCGTGTTTTACGCGGATTACGTGGTGATTCAGTACGTGCTGATCCCCGCCTACTCCGGCAGtgtttggTGCACTCTTCATGGATCagtatttaatgttatattgttACTGCTTCTGGCATGCCATTCAAAAGCAGTGTTCTCAGACCCAGGTATGGTTCCTCTTCCTGAGACAGCTATTGATTTCTCAGACCTGAGGTCTCAGTCCAACCGTATGAATGACAGGGGCTGCGAGGGCTGGACCGTCTGCAGTCGCTGTGAAACATATCGACCCCCCCGTGCACATCACTGCCGGGTGTGTCAGCGCTGCATCAGACGCATGGACCATCACTGCCCATGGTCA

Function

symbol description
zgc:77880 Predicted to enable protein-cysteine S-palmitoyltransferase activity. Predicted to be involved in peptidyl-L-cysteine S-palmitoylation and protein targeting to membrane. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus and endoplasmic reticulum.

NR:

description
PREDICTED: palmitoyltransferase ZDHHC3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139745 True 421 TUCP 0.53 4 13929065 13935667

Neighbor

gene id symbol gene type direction distance location
eif3f eif3f,LOC107723164,LOC107758850,LOC107665937 coding upstream 1267 13921248 ~ 13927798 (+)
LOC103047056 npy2rl,LOC108439369,LOC107758849,LOC107590775,LOC107714138,LOC107665946,LOC107692719 coding upstream 123836 13773430 ~ 13805229 (+)
LOC103023349 LOC108439383,LOC108258976 coding upstream 248844 13676444 ~ 13680221 (+)
LOC103023667 LOC108439371 coding upstream 252708 13673298 ~ 13676357 (+)
LOC103024001 LOC108439370,LOC108258974,LOC107758869,LOC107590749 coding upstream 263319 13630617 ~ 13665746 (+)
LOC111193619 NA coding downstream 116137 14051804 ~ 14061543 (+)
LOC103033906 LOC108258922,LOC108439361,LOC107564279,LOC107692629,LOC107665976 coding downstream 288313 14223980 ~ 14244056 (+)
LOC103031172 LOC103031172,LOC108439360 coding downstream 347260 14282927 ~ 14290159 (+)
LOC103031792 LOC108439359,LOC107723198,LOC107564241,LOC107692626,LOC100334711 coding downstream 373259 14308926 ~ 14330415 (+)
knl1 NA coding downstream 452791 14388458 ~ 14409396 (+)
G103349 NA non-coding upstream 18722 13888907 ~ 13910343 (+)
G103347 NA non-coding upstream 60842 13867413 ~ 13868223 (+)
G103323 NA non-coding upstream 163599 13757846 ~ 13765466 (+)
LOC111193536 NA non-coding upstream 303619 13606108 ~ 13625446 (+)
LOC111193537 NA non-coding upstream 323687 13603596 ~ 13605378 (+)
G103389 NA non-coding downstream 88625 14024292 ~ 14079252 (+)
LOC111193479 NA non-coding downstream 126002 14061669 ~ 14062007 (+)
G103410 NA non-coding downstream 184071 14119738 ~ 14129753 (+)
G103464 NA non-coding downstream 263370 14199037 ~ 14199576 (+)
G103482 NA non-coding downstream 313453 14249120 ~ 14249825 (+)
sh3pxd2a sh3pxd2a other upstream 896559 12851001 ~ 13032506 (+)
cryzl1 cryzl1 other upstream 1406762 12483622 ~ 12522303 (+)
cab39l cab39l,LOC107676861,LOC107718429 other upstream 1904301 12000639 ~ 12024764 (+)
map2k7 map2k7,LOC107676852,LOC107712243 other upstream 2634250 11274746 ~ 11294815 (+)
LOC111193528 NA other upstream 3058909 10868577 ~ 10870156 (+)
G103490 LOC106510829 other downstream 324958 14260625 ~ 14261539 (+)
G103551 NA other downstream 682968 14618635 ~ 14619082 (+)
G103561 NA other downstream 755376 14691043 ~ 14692199 (+)
LOC103032764 LOC108443686,LOC108258285,LOC107746061,LOC107684317,LOC107566138,LOC105891017,LOC107690754,LOC107086972 other downstream 1063788 14999455 ~ 15297939 (+)
G104000 NA other downstream 2515508 16451175 ~ 16458209 (+)

Expression


Co-expression Network