Gene
RNA
| Item | Value |
|---|---|
| gene id | G53048 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 4479698 ~ 4512678 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: fibroblast growth factor receptor 2 isoform X6 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU60414 | False | 1867 | lncRNA | 0.47 | 11 | 4479698 | 4512678 |
| TU60419 | True | 309 | lncRNA | 0.46 | 2 | 4510951 | 4512678 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_04196309_04197268 | DNAJC28 | coding | downstream | 282430 | 4196309 ~ 4197268 (-) |
| CI01000009_04069741_04071278 | NA | coding | downstream | 408094 | 4069714 ~ 4071604 (-) |
| CI01000009_04015167_04016764 | NA | coding | downstream | 462861 | 4015005 ~ 4016837 (-) |
| CI01000009_03791699_03858262 | NCAM2 | coding | downstream | 620464 | 3790698 ~ 3859234 (-) |
| CI01000009_03770045_03770497 | NA | coding | downstream | 709201 | 3769910 ~ 3770497 (-) |
| CI01000009_04738315_04741396 | RALB.S, RALBA, RALB.L, RALB | coding | upstream | 225551 | 4738229 ~ 4742426 (-) |
| CI01000009_04778332_04780190 | NA | coding | upstream | 265375 | 4778053 ~ 4786216 (-) |
| CI01000009_04888729_04895882 | NA | coding | upstream | 375519 | 4888197 ~ 4896479 (-) |
| CI01000009_04976520_04987680 | NA | coding | upstream | 463808 | 4976486 ~ 4987707 (-) |
| CI01000009_05046374_05094978 | SEMA5B, SEMA5BA | coding | upstream | 533622 | 5046300 ~ 5095973 (-) |
| G53002 | NA | non-coding | downstream | 56 | 4359587 ~ 4479642 (-) |
| G53007 | NA | non-coding | downstream | 65683 | 4371422 ~ 4414015 (-) |
| G52995 | NA | non-coding | downstream | 152013 | 4327486 ~ 4327685 (-) |
| G52878 | NA | non-coding | downstream | 197893 | 4281345 ~ 4281805 (-) |
| G52831 | NA | non-coding | downstream | 372328 | 4107147 ~ 4107370 (-) |
| G53055 | NA | non-coding | upstream | 2203 | 4514881 ~ 4539189 (-) |
| G53068 | NA | non-coding | upstream | 34313 | 4546991 ~ 4557556 (-) |
| G53081 | NA | non-coding | upstream | 77296 | 4589974 ~ 4596305 (-) |
| G53088 | NA | non-coding | upstream | 93880 | 4606558 ~ 4609919 (-) |
| G53090 | NA | non-coding | upstream | 105912 | 4618590 ~ 4618985 (-) |
| G52828 | NA | other | downstream | 248229 | 4217420 ~ 4231469 (-) |
| CI01000009_03261739_03262843 | NA | other | downstream | 1217741 | 3261038 ~ 3262843 (-) |
| CI01000009_02885473_02893975 | NA | other | downstream | 1580291 | 2883688 ~ 2893975 (-) |
| G52410 | NA | other | downstream | 1917165 | 2551724 ~ 2562533 (-) |
| G53515 | NA | other | upstream | 989717 | 5502395 ~ 5505248 (-) |
| G55814 | NA | other | upstream | 3913143 | 8425821 ~ 8428012 (-) |
| CI01000009_08858198_08860555 | NA | other | upstream | 4345474 | 8856310 ~ 8860563 (-) |
| G59097 | NA | other | upstream | 7775539 | 12288217 ~ 12289518 (-) |
| CI01000009_13975122_13976026 | NA | other | upstream | 9462710 | 13975099 ~ 13978614 (-) |
