G103561


Basic Information

Item Value
gene id G103561
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 14691043 ~ 14692199 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU139988
GGTGGAGTGGAGGACTCATCGCTGCTGGCTGCTGCTGTTCATCTTCCTGGACTGATCCAGAAACCTTATCCTTTATCTGGCAAAGACTATTTTTCCTAAAATGTCTGACCAttcagaggaggagagggacTCTGATAATGGGGTTGAGCCAGAAGAATCGGACATTCAGAAACAAATTGGTGAACTGAACAGAAAACATGCTGTAGCAATGGCAACCATTGATTCCTTGAATAGGATGCCTGATAGAACATATGTCTATGTGCCACGAGAGCGTCACATTGCTCCGTTTACTGGTGATTTTGAAAAAGATGGAAGACTAGTAGATGATTTCATTGAGGAAACTGAACGCGTCTTACGTGCACGCAGTCAGTCTCCTCCTGAGCAGTATGACTTTGTTCTCTCTTTGTTGCGAGGGGCTGCATTAGAAGAGGTACGTTTACGAAGTGATAGTGAAGTAGATCAGGTTAGTGACCTGTTCACCTACCTTCGGGAAGCTTTTAGTGATAGGCGTAGTGGGGCTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139988 True 522 TUCP 0.45 2 14691043 14692199

Neighbor

gene id symbol gene type direction distance location
dmd LOC108439357 coding upstream 26284 14410683 ~ 14664759 (+)
knl1 NA coding upstream 281647 14388458 ~ 14409396 (+)
LOC103031792 LOC108439359,LOC107723198,LOC107564241,LOC107692626,LOC100334711 coding upstream 360628 14308926 ~ 14330415 (+)
LOC103031172 LOC103031172,LOC108439360 coding upstream 400884 14282927 ~ 14290159 (+)
LOC103033906 LOC108258922,LOC108439361,LOC107564279,LOC107692629,LOC107665976 coding upstream 446987 14223980 ~ 14244056 (+)
LOC103039857 caly,LOC103039857,LOC108434710,LOC108258305,LOC105891014,LOC107583165,LOC107684294 coding downstream 1543829 16236028 ~ 16254238 (+)
LOC103039552 NA coding downstream 1628923 16321122 ~ 16325115 (+)
taf5 taf5,LOC102783881 coding downstream 1680591 16372790 ~ 16383498 (+)
pdcd11 pdcd11,LOC104950700 coding downstream 1695857 16388056 ~ 16418412 (+)
LOC103038100 NA coding downstream 1750759 16442958 ~ 16448489 (+)
G103554 NA non-coding upstream 56759 14628264 ~ 14634284 (+)
G103552 NA non-coding upstream 57820 14625158 ~ 14633223 (+)
G103553 NA non-coding upstream 66909 14623642 ~ 14624134 (+)
G103544 NA non-coding upstream 145114 14544504 ~ 14545929 (+)
G103524 NA non-coding upstream 180903 14431912 ~ 14510140 (+)
G103738 NA non-coding downstream 103047 14795246 ~ 14795613 (+)
G103746 NA non-coding downstream 110901 14803100 ~ 14805859 (+)
G103747 NA non-coding downstream 114285 14806484 ~ 14806972 (+)
G103748 NA non-coding downstream 115258 14807457 ~ 14808320 (+)
G103779 NA non-coding downstream 175747 14867946 ~ 14868171 (+)
G103551 NA other upstream 71961 14618635 ~ 14619082 (+)
G103490 LOC106510829 other upstream 429504 14260625 ~ 14261539 (+)
G103376 zgc:77880,LOC108439367,LOC107692630,LOC107723165,LOC103363053,LOC107758853,LOC105904859,LOC107590776 other upstream 755376 13929065 ~ 13935667 (+)
sh3pxd2a sh3pxd2a other upstream 1658537 12851001 ~ 13032506 (+)
cryzl1 cryzl1 other upstream 2168740 12483622 ~ 12522303 (+)
LOC103032764 LOC108443686,LOC108258285,LOC107746061,LOC107684317,LOC107566138,LOC105891017,LOC107690754,LOC107086972 other downstream 307256 14999455 ~ 15297939 (+)
G104000 NA other downstream 1758976 16451175 ~ 16458209 (+)
col17a1 col17a1,LOC108434660,LOC107684270,LOC107583183 other downstream 1771739 16463938 ~ 16507787 (+)
LOC103037450 NA other downstream 1863495 16555694 ~ 16574433 (+)
LOC103035065 nhlh2,LOC103035065,LOC108434665,LOC108258389,LOC107739819,LOC105019883 other downstream 2196187 16888386 ~ 16894592 (+)

Expression


Co-expression Network