LOC103031769 (prps2)


Basic Information

Item Value
gene id LOC103031769
gene name prps2
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 17119847 ~ 17138973 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU140760
CGTTCTCTTTTGGAGTGACGGGCTCGCTCGTCATTTCCTTTTCGCCCCGGTCTCTCACTCCGTGCAGATCTAGGATGCAGAGCTGCAGTTTTAGATCACTTTAATCTCTAACctttcctcctccacctcctcctctcctcctcctccccggCAGAAGTCCGTCTCTCTGTCCGCACAGCGCGCTCTCTTTCTCCGCCTGAGCTCCTCCAGCACCGCCGCCGCCGCGCTGCAGCCATGCCCAACATCGTGCTCTTCAGCGGGAGCTCTCACCACGACCTGTCCCAGAAGGTGGCGGACCGCCTCGGACTGGATCTGGGGAAAGTCATCACTAAGAAGTTCAGTAATCAGGAGACCTGTGTGGAGATAGGTGAGAGTGTACGAGGGGAGGATGTGTACATCGTGCAGAGCGGCTGTGGAGAGATTAATGACAACCTGATGGAGCTGCTGATTATGATCAACGCCTGCAAGATCGCCTCCTCATCACGCGTCACTGCCGTCATTCCCTGCTTTCCCTACGCCCGACAGGACAAGAAGGACAAGGTCAGAAACCTGTTAAAACCCCTAAACCAGCAAAGACCAGTGTGTGGGTCCAGGTTTGGTCTCTCTTATAACT
>TU140767
aattttacagctttaaaactcaAAGTGGGTGGTCCAGTTGTGGAcaaggccatgaatactaatttatGAGttgatatatatgatatatgatatgatatgcaTACCTCAATGTTTTATCCAAGTATACATTTGGGACATTTTTGTAGCTGCCGTTTATTTCAAAAAGTAgaatttcttgtttatttaagaTAATGTAGGTCAAAAAGTGTGTACTGTCCAGTAGATACAGGTGTAGGTTCCTGTTCCCTTCTCTTATTGGACGAGCTAGACACTGGGCTTAAGTTATCTATCTTATCTAACTCTAGAAGAAATTCTGCACTGGCCTGGCTAAGCTATTtagtagggatgcaccgataTGAAAATTTTcggctgaaaaaaatgtaagtttgaGACAAATATCAACACTGGACGTTTTTTTACGGAGATTTTCGTAAATTATAAAACTATTTTCACCAATGCATACATTTAATGTAGGCTCCAATTTacttttgtcttgcttttcaaagtaaaaaaaagctattacaaaagtacagtttaaacaaatgaacaacgCACAATATGACTATTATTATAAACgcacaatataaataaatgtcattgttcaaaataaattattggatattttcacttttttgacCGAACAACAGATGGCATTTTTCCCCCAGATTGCCAGTTTCTGCCAAATCATTCGATGCATCCCTATTATTTATAAGCAACAAAATATGAGTAACGGCACATTCATACTAAAACAAATATGCTTCAAGTCCAGTCATTCAGTTTAAGATATTGCTCatcaaatgtgtatttttaattaaaaacccCTATTTGTTGATCTTTATAAAAAATGCAAAGGAAAAAAGACTATCACAATGGCTAAAAGACTGTTTTCAGATAAAGTATATGAACATGCTGCTGTGACCTATTGAAGTTGGACTTTGTATTGATTCTTGATTCTGTTCTCATAATTTCATGGCATTCATATTGCCACTTTACAAACATTCTTTAAACAGTTTTTGCCTTTAAATAGGCATTCCATAAACAGTTGTACCACTAATGTTACAGTACTTAGGACAATGTAGAATCGAAACATTACAGTTACTGTGTTGGAATGTTCAGCTATTTTGTGTTGTGGCCGCACACTAATGTTTTGTCTCAGTCTATAAGGATATACCTGTTGATCAGCGCTTTGTCTAAGATTCATACATAGCTCTTTGCCTTTAAGTTGAGTCAAAAACAGTTCAAGTGGCTGAACTGTTGAACTGATTGCAGATTCATTATGGAAACTTTACACAATATCCGTCACAAGCACTGACATCGGATGCATTGATGGTGGAATTCTGGGCCAGTTCCAGCCTATGTCATTTTTCATGTCTGTTTTTACTGCAGAGGTGTGCACTGTCATGAAACTGATGGGTGAACCTGATCTTTTTAATGGTCAGTCATATTTCTGTTGTTATCACAAAGAGTTTTCACGATAAACACATTGGGGAAACATTGTAAAAATGCCTTGAATAACCGAAAACTTCAGTTGCATTACCTGTGTGCAGCAAAAGAGGGTGAGCGTGATGCTGCAGGCTTAGACATAACTAGAATGGAGGCAGGGGTAGAGGTAGAGCTTTATAGTGAACCAGTGGACCTAATTACTACTTAGCCGAGGAAAAATTAGTGCAACCAAGCCAAGTGCTGAAAAACGTTCAAGgagctttaatttagaatttaaaTTTATCATGTCACATTGCATAAATTTTAGGGATAGTATTTTTATactagtaaatataaaactgaactctatccgtACTTGAGAGTAAATCTACTGCGTAAAAAGTACTATGATAAAATCCCAATGTTTGTCAGTATTTTGGTTGGACCAGGTCAAGAGAACCAGAGAGAAATGTAAATCCAAAAATGTTACTGGTTGAACGTAGTGCCTTAAAAGATccccaagattttttttttttttttttttaataaaaggaaaaagCAGAGTTGGAAGGGaacaaaatattcaaaataatgGCATGAACATTCTGGCACAACCATCTCTGCAAcatctaataaaatatattctaaaaacACAGTGGTCTGGTAGGGTAGTTGGAGTGTAATTGATCTCTACATTTTGAGGGTATTTACTAAATGAACAAAACTATATACTTTAAAAGTATGCTGGGTGTCCGAGGTCTACAAATCCCAGAAACTCACAGCCTGTCGCTTTTAAAGAACCAATTACAGGACCCAGTGCTTCACCATCAATGCTTACCTGTGACCTCCAACCATTGAAAGCGACTATCCCTTTAATCTCCACTGCTCACAGAATGTACTAGAAACTATTCCCTCTtatcttatttaaaataaataaggcctCCCAGGAGCAAATTAGACCTATTACAGTAAAATTGACCCTAGATCAGCACGAAAGAGCAATGCGAAGGACAGAATGAAGCTCTGGCTCAGGGATGTCTGAAGATTGCGGCTTTGCCTGGgttgttttttaaagttttgacgAAGGCTCCTAATTTCTTAGATGTGAGAATGGCTTTAGAAAGAGCAGCCATCACATTATTAGTGGGATGCAGTGACCAAGTGCTTCCAGCTTCACAACTCTGATGATGCCCTGTCTGTTTCAAAATGACAACCGAATTAAAAGTAATGCTT
>XM_022674790.1
CGGGCTCGCTCGTCATTTCCTTTTCGCCCCGGTCTCTCACTCCGTGCAGATCTAGGATGCAGAGCTGCAGTTTTAGATCACTTTAATCTCTAACctttcctcctccacctcctcctctcctcctcctccccggCAGAAGTCCGTCTCTCTGTCCGCACAGCGCGCTCTCTTTCTCCGCCTGAGCTCCTCCAGCACCGCCGCCGCCGCGCTGCAGCCATGCCCAACATCGTGCTCTTCAGCGGGAGCTCTCACCACGACCTGTCCCAGAAGGTGGCGGACCGCCTCGGACTGGATCTGGGGAAAGTCATCACTAAGAAGTTCAGTAATCAGGAGACCTGTGTGGAGATAGGTGAGAGTGTACGAGGGGAGGATGTGTACATCGTGCAGAGCGGCTGTGGAGAGATTAATGACAACCTGATGGAGCTGCTGATTATGATCAACGCCTGCAAGATCGCCTCCTCATCACGCGTCACTGCCGTCATTCCCTGCTTTCCCTACGCCCGACAGGACAAGAAGGACAAGGTCAGAAACCTGTTAAAACCCCTAAACCAGCAAAGACCAGTTATAGCATATGTGCTATATAATTGCTGTAGTCTAATTTTGAGTtgtgtataaatattaattatgcaTTTTGTGTCCCTCCTACAACAGGGCTTTTTTGACATCGCTGTGGACAATCTTTACGCAGAACCAGCTGTTCTACAGTGGATCCGAGAGAACATTCCAGAGTGGAAAAACTGCATTATTGTGTCACCCGACGCTGGCGGTGCTAAAAgGGTGACGTCCATTGCTGACCGCCTAAATGTTGAGTTTGCCCTCATCCATAAAGAGCGTAAGAAGGCCAATGAGGTCGACCGTATGGTCCTGGTGGGAGACGTGAAGGACCGTGTGGCCATCCTCGTGGATGACATGGCAGATACATGTGGAACCATTTGCCATGCTGCTGATAAGCTCATCTCTGCTGGTGCAATAAAGGTCTATGCCATCCTCACTCACGGCATCTTCTCTGGACCTGCCATCTCGCGCATCAACAACGCCCCCTTTGAAGCCGTGGTGGTCACCAACACCATTCCACAAGAGGAGAAGATGAAGCAGTGTCCCAAAATTCAGGTCATCGACATTTCAATGATTTTGGCAGAGGCCATTCGAAGAACCCACAATGGTGAATCAGTCTCGTACCTCTTCAGCCACGTCCCTCTGTAAAGACCGCTTGAGAAGATCAGGGGTTGGACCTACTTTCTCCACCATCAGCCATTCCAGTATCATTCCTGTGTGGGAGCCTAAAGAGTGAATTCCATTTAGCATCCAATAGCAAGTGACTGGCTCGTACTGAATCCCACCAGCATTACTAAACTTTTCCTCCATCATTCCCTCACAGCAAACTActgcagcatttttatttatcatttatgatgcttttttgattaattgttttatttcatccCTGAttcattacaatgttttttttgtattactgGCCTGGATCTGGCTTTTGCCTTAACCAAAGATCTTGATGCCAATTGCCTGTTTAATATCCATTTTGTAccttagttgttttttttttttttttcttcaattgaACATAAAATGAAAAGTAAGCTGcaggatctgaaaaaaaaatctactgacctcttttttcttcttcagttgacttattattctctttatttcatttagatTATTTAGAGCAGTTGTGCAGTTCTACTAAAGATATAGATCTTTTCAGCAAATGTTCTGATGTTTTCAGCCGTTTAGTGTTAACTGATTTTGGATTTGGTTTCTAAATGGAAGAAGAAATTATCTCAGAGATGACTATACTGTAATTGTTACAACATAGTTCTCATTATATCTTAAACAACTTGACAGTATTCATGTTCTCATGTATTCAAACGGTTAATTCTTACACTCAGTTTGAGTTTAAACATGTCAAAAGTGtaagaatttaatttttttgctttgttagctacattacatTTGTAGCTCCAGTACAAAAACAGCTTAAACTTAAGTCTTAATTGAGCCAGCCAATCATTAAAAGTTATGGGCCACGTGTAAGAAACAAGGAGTAATGGGTCTTCATTCAAACTTGGCTGCTtgatttgtcttttatttttaccacTTCCTTAATGCATACCTCAATGTTTTATCCAAGTATACATTTGGGACATTTTTGTAGCTGCCGTTTATTTCAAAAAGTAgaatttcttgtttatttaagaTAATGTAGGTCAAAAAGTGTGTACTGTCCAGTAGATACAGGTGTAGGTTCCTGTTCCCTTCTCTTATTGGACGAGCTAGACACTGGGCTTAAGTTATCTATCTTATCTAACTCTAGAAGAAATTCTGCACTGGCCTGGCTAAGCTATTtagtagggatgcaccgataTGAAAATTTTcggctgaaaaaaatgtaagtttgaGACAAATATCAACACTGGACGTTTTTTTACGGAGATTTTCGTAAATTATAAAACTATTTTCACCAATGCATACATTTAATGTAGGCTCCAATTTacttttgtcttgcttttcaaagtaaaaaaaagctattacaaaagtacagtttaaacaaatgaacaacgCACAATATGACTATTATTATAAACgcacaatataaataaatgtcattgttcaaaataaattattggatattttcacttttttgacCGAACAACAGATGGCATTTTTCCCCCAGATTGCCAGTTTCTGCCAAATCATTCGATGCATCCCTATTATTTATAAGCAACAAAATATGAGTAACGGCACATTCATACTAAAACAAATATGCTTCAAGTCCAGTCATTCAGTTTAAGATATTGCTCatcaaatgtgtatttttaattaaaaacccCTATTTGTTGATCTTTATAAAAAATGCAAAGGAAAAAAGACTATCACAATGGCTAAAAGACTGTTTTCAGATAAAGTATATGAACATGCTGCTGTGACCTATTGAAGTTGGACTTTGTATTGATTCTTGATTCTGTTCTCATAATTTCATGGCATTCATATTGCCACTTTACAAACATTCTTTAAACAGTTTTTGCCTTTAAATAGGCATTCCATAAACAGTTGTACCACTAATGTTACAGTACTTAGGACAATGTAGAATCGAAACATTACAGTTACTGTGTTGGAATGTTCAGCTATTTTGTGTTGTGGCCGCACACTAATGTTTTGTCTCAGTCTATAAGGATATACCTGTTGATCAGCGCTTTGTCTAAGATTCATACATAGCTCTTTGCCTTTAAGTTGAGTCAAAAACAGTTCAAGTGGCTGAACTGTTGAACTGATTGCAGATTCATTATGGAAACTTTACACAATATCCGTCACAAGCACTGACATCGGATGCATTGATGGTGGAATTCTGGGCCAGTTCCAGCCTATGTCATTTTTCATGTCTGTTTTTACTGCAGAGGTGTGCACTGTCATGAAACTGATGGGTGAACCTGATCTTTTTAATGGTCAGTCATATTTCTGTTGTTATCACAAAGAGTTTTCACGATAAACACATTGGGGAAACATTGTAAAAATGCCTTGAATAACCGAAAACTTCAGTTGCATTACCTGTGTGCAGCAAAAGAGGGTGAGCGTGATGCTGCAGGCTTAGACATAACTAGAATGGAGGCAGGGGTAGAGGTAGAGCTTTATAGTGAACCAGTGGACCTAATTACTACTTAGCCGAGGAAAAATTAGTGCAACCAAGCCAAGTGCTGAAAAACGTTCAAGgagctttaatttagaatttaaaTTTATCATGTCACATTGCATAAATTTTAGGGATAGTATTTTTATactagtaaatataaaactgaactctatccgtACTTGAGAGTAAATCTACTGCGTAAAAAGTACTATGATAAAATCCCAATGTTTGTCAGTATTTTGGTTGGACCAGGTCAAGAGAACCAGAGAGAAATGTAAATCCAAAAATGTTACTGGTTGAACGTAGTGCCTTAAAAGATccccaagattttttttttttttttttttaataaaaggaaaaagCAGAGTTGGAAGGGaacaaaatattcaaaataatgGCATGAACATTCTGGCACAACCATCTCTGCAAcatctaataaaatatattctaaaaacACAGTGGTCTGGTAGGGTAGTTGGAGTGTAATTGATCTCTACATTTTGAGGGTATTTACTAAATGAACAAAACTATATACTTTAAAAGTATGCTGGGTGTCCGAGGTCTACAAATCCCAGAAACTCACAGCCTGTCGCTTTTAAAGAACCAATTACAGGACCCAGTGCTTCACCATCAATGCTTACCTGTGACCTCCAACCATTGAAAGCGACTATCCCTTTAATCTCCACTGCTCACAGAATGTACTAGAAACTATTCCCTCTtatcttatttaaaataaataaggcctCCCAGGAGCAAATTAGACCTATTACAGTAAAATTGACCCTAGATCAGCACGAAAGAGCAATGCGAAGGACAGAATGAAGCTCTGGCTCAGGGATGTCTGAAGATTGCGGCTTTGCCTGGgttgttttttaaagttttgacgAAGGCTCCTAATTTCTTAGATGTGAGAATGGCTTTAGAAAGAGCAGCCATCACATTATTAGTGGGATGCAGTGACCAAGTGCTTCCAGCTTCACAACTCTGATGATGCCCTGTCTGTTTCAAAATGACAACCGAATTAAAAGTAATGCTTTGACCATG

Function

symbol description
prps2 Enables identical protein binding activity. Predicted to be involved in 5-phosphoribose 1-diphosphate biosynthetic process and purine nucleotide biosynthetic process. Predicted to be part of ribose phosphate diphosphokinase complex. Predicted to be active in cytoplasm.

NR:

description
PREDICTED: ribose-phosphate pyrophosphokinase 2

GO:

id name namespace
GO:0009165 nucleotide biosynthetic process biological_process
GO:0016310 phosphorylation biological_process
GO:0004749 ribose phosphate diphosphokinase activity molecular_function
GO:0016301 kinase activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU140760 False 613 TUCP 0.56 2 17119847 17127310
TU140767 False 2655 lncRNA 0.36 2 17134042 17138965
XM_022674790.1 True 4693 mRNA 0.39 6 17119865 17138973

Neighbor

gene id symbol gene type direction distance location
LOC103032094 NA coding upstream 2626 17113310 ~ 17117221 (+)
LOC103032412 gk,LOC107742635,LOC107700103,LOC107667651 coding upstream 10287 17081201 ~ 17109560 (+)
timmdc1 timmdc1 coding upstream 42934 17065402 ~ 17076913 (+)
poglut1 poglut1 coding upstream 59687 17049429 ~ 17060160 (+)
vangl1 vangl1,LOC107552384,LOC107748077,LOC107588836 coding upstream 99645 16909648 ~ 17020202 (+)
chst10 chst10 coding downstream 3560 17142533 ~ 17149608 (+)
lonrf2 lonrf2 coding downstream 44040 17183013 ~ 17199615 (+)
map4k4 map4k4,LOC108258915,LOC106574534,LOC106575325,LOC107668172,LOC107588849,LOC107707082 coding downstream 74861 17213834 ~ 17317203 (+)
LOC103030825 NA coding downstream 183272 17322245 ~ 17325366 (+)
LOC103032976 si:dkey-1h24.2,LOC108434752,LOC108258345,LOC107707829,LOC560392 coding downstream 285970 17424943 ~ 17473397 (+)
G104162 NA non-coding upstream 72107 17046772 ~ 17047740 (+)
G104151 NA non-coding upstream 185364 16927224 ~ 16934483 (+)
G104144 NA non-coding upstream 258645 16860988 ~ 16861202 (+)
G104082 LOC107662997,LOC107757412,LOC108434698,LOC107707084 non-coding upstream 432474 16682740 ~ 16687373 (+)
G104001 NA non-coding upstream 573837 16544256 ~ 16546010 (+)
G104177 NA non-coding downstream 43323 17182296 ~ 17182538 (+)
G104183 LOC103030517,LOC108434725,LOC100705727,LOC101474240,LOC102192248,LOC103374257,LOC106510766 non-coding downstream 215456 17354429 ~ 17356491 (+)
G104190 NA non-coding downstream 343151 17482124 ~ 17485186 (+)
G104196 NA non-coding downstream 458175 17597148 ~ 17597444 (+)
G104204 NA non-coding downstream 562714 17701687 ~ 17701919 (+)
LOC103035065 nhlh2,LOC103035065,LOC108434665,LOC108258389,LOC107739819,LOC105019883 other upstream 225255 16888386 ~ 16894592 (+)
LOC103037450 NA other upstream 545414 16555694 ~ 16574433 (+)
col17a1 col17a1,LOC108434660,LOC107684270,LOC107583183 other upstream 612060 16463938 ~ 16507787 (+)
G104000 NA other upstream 661638 16451175 ~ 16458209 (+)
LOC103032764 LOC108443686,LOC108258285,LOC107746061,LOC107684317,LOC107566138,LOC105891017,LOC107690754,LOC107086972 other upstream 1821908 14999455 ~ 15297939 (+)
LOC111193547 NA other downstream 267622 17406595 ~ 17419138 (+)
G104656 pcdh8 other downstream 1780087 18919060 ~ 18923203 (+)
nfkbiz nfkbiz other downstream 2595253 19734226 ~ 19744924 (+)
G105276 NA other downstream 3850300 20989273 ~ 21055483 (+)
G105312 abcb6,abcb6a,LOC107556273,LOC107750068 other downstream 3880065 21019038 ~ 21028990 (+)

Expression


Co-expression Network