Gene
RNA
| Item | Value |
|---|---|
| gene id | G53100 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 4634534 ~ 4638036 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU60475 | True | 661 | lncRNA | 0.49 | 5 | 4634534 | 4638036 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_04196309_04197268 | DNAJC28 | coding | downstream | 437266 | 4196309 ~ 4197268 (-) |
| CI01000009_04069741_04071278 | NA | coding | downstream | 562930 | 4069714 ~ 4071604 (-) |
| CI01000009_04015167_04016764 | NA | coding | downstream | 617697 | 4015005 ~ 4016837 (-) |
| CI01000009_03791699_03858262 | NCAM2 | coding | downstream | 775300 | 3790698 ~ 3859234 (-) |
| CI01000009_03770045_03770497 | NA | coding | downstream | 864037 | 3769910 ~ 3770497 (-) |
| CI01000009_04738315_04741396 | RALB.S, RALBA, RALB.L, RALB | coding | upstream | 100193 | 4738229 ~ 4742426 (-) |
| CI01000009_04778332_04780190 | NA | coding | upstream | 140017 | 4778053 ~ 4786216 (-) |
| CI01000009_04888729_04895882 | NA | coding | upstream | 250161 | 4888197 ~ 4896479 (-) |
| CI01000009_04976520_04987680 | NA | coding | upstream | 338450 | 4976486 ~ 4987707 (-) |
| CI01000009_05046374_05094978 | SEMA5B, SEMA5BA | coding | upstream | 408264 | 5046300 ~ 5095973 (-) |
| G53092 | NA | non-coding | downstream | 823 | 4620939 ~ 4633711 (-) |
| G53090 | NA | non-coding | downstream | 15549 | 4618590 ~ 4618985 (-) |
| G53088 | NA | non-coding | downstream | 24615 | 4606558 ~ 4609919 (-) |
| G53081 | NA | non-coding | downstream | 38229 | 4589974 ~ 4596305 (-) |
| G53068 | NA | non-coding | downstream | 76978 | 4546991 ~ 4557556 (-) |
| G53101 | NA | non-coding | upstream | 4132 | 4642168 ~ 4643117 (-) |
| G53112 | NA | non-coding | upstream | 27434 | 4665470 ~ 4665824 (-) |
| G53119 | NA | non-coding | upstream | 38425 | 4676461 ~ 4676686 (-) |
| G53124 | NA | non-coding | upstream | 42321 | 4680357 ~ 4680665 (-) |
| G53134 | NA | non-coding | upstream | 51059 | 4689095 ~ 4689334 (-) |
| G52828 | NA | other | downstream | 403065 | 4217420 ~ 4231469 (-) |
| CI01000009_03261739_03262843 | NA | other | downstream | 1372577 | 3261038 ~ 3262843 (-) |
| CI01000009_02885473_02893975 | NA | other | downstream | 1735127 | 2883688 ~ 2893975 (-) |
| G52410 | NA | other | downstream | 2072001 | 2551724 ~ 2562533 (-) |
| G53515 | NA | other | upstream | 864359 | 5502395 ~ 5505248 (-) |
| G55814 | NA | other | upstream | 3787785 | 8425821 ~ 8428012 (-) |
| CI01000009_08858198_08860555 | NA | other | upstream | 4220116 | 8856310 ~ 8860563 (-) |
| G59097 | NA | other | upstream | 7650181 | 12288217 ~ 12289518 (-) |
| CI01000009_13975122_13976026 | NA | other | upstream | 9337352 | 13975099 ~ 13978614 (-) |
