G104702


Basic Information

Item Value
gene id G104702
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 19118654 ~ 19120266 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU141432
gataaaatacaaaatacacacctactgtacatataaacacatagaaaaacacactgttcatttaaacactgtacaaataaacacattgcGTTAAGTTAAACACCACAGGAAAGATACTACTCGTAGTCTAAAATACCGAATCagaattttcagatttttcaatTTCCAATTCAGGCCACTTCAAAATGTGGTTCTGAAATCCAATACAGATCTGATTTGCAGCAATGTGAGGAACATAAGCACACAATGGGAAAATGGATGTGAGGAGATTAAgaaacagACAACAGCAGTGAGTGAGGGTTTCAGTGCTGGATCAGTGAGGTAACAAACCTCATAAATATGTATTAGTtcagtatttaataaaatattctcttaaaggagaactctggtgtaaaatggacttttggtgtagtaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141432 True 417 lncRNA 0.34 2 19118654 19120266

Neighbor

gene id symbol gene type direction distance location
LOC111193549 NA coding upstream 51167 19057398 ~ 19067487 (+)
LOC103024880 NA coding upstream 67738 19033405 ~ 19050916 (+)
LOC103033226 NA coding upstream 95733 19014406 ~ 19022921 (+)
LOC103024565 LOC108434738 coding upstream 105688 19008566 ~ 19012966 (+)
sugt1 sugt1,LOC104941757 coding upstream 223123 18860729 ~ 18895531 (+)
LOC103025512 fgf14,LOC108434733,LOC108258297,LOC105911936 coding downstream 48617 19168883 ~ 19309236 (+)
LOC103035666 LOC108434719 coding downstream 289041 19409307 ~ 19411213 (+)
LOC103025817 LOC108434731,LOC106575534,LOC106575594 coding downstream 292754 19413020 ~ 19419379 (+)
LOC103036301 pspc1,LOC108258933,LOC108434730 coding downstream 305117 19425383 ~ 19457166 (+)
LOC103036999 LOC108434729 coding downstream 362360 19482626 ~ 19532872 (+)
G104680 NA non-coding upstream 87343 19031017 ~ 19031311 (+)
G104666 NA non-coding upstream 89289 19027152 ~ 19029365 (+)
G104667 NA non-coding upstream 92068 18998535 ~ 19026586 (+)
G104660 NA non-coding upstream 162601 18941098 ~ 18956053 (+)
G104658 NA non-coding upstream 188261 18930035 ~ 18930393 (+)
G104706 NA non-coding downstream 27438 19147704 ~ 19150962 (+)
G104712 NA non-coding downstream 85160 19205426 ~ 19205714 (+)
G104729 NA non-coding downstream 202742 19323008 ~ 19323230 (+)
G104798 NA non-coding downstream 413768 19534034 ~ 19534314 (+)
G104799 NA non-coding downstream 414190 19534456 ~ 19536048 (+)
G104656 pcdh8 other upstream 195451 18919060 ~ 18923203 (+)
LOC111193547 NA other upstream 1699516 17406595 ~ 17419138 (+)
LOC103031769 prps2 other upstream 1979681 17119847 ~ 17138973 (+)
LOC103035065 nhlh2,LOC103035065,LOC108434665,LOC108258389,LOC107739819,LOC105019883 other upstream 2224062 16888386 ~ 16894592 (+)
LOC103037450 NA other upstream 2544221 16555694 ~ 16574433 (+)
nfkbiz nfkbiz other downstream 613960 19734226 ~ 19744924 (+)
G105276 NA other downstream 1869007 20989273 ~ 21055483 (+)
G105312 abcb6,abcb6a,LOC107556273,LOC107750068 other downstream 1898772 21019038 ~ 21028990 (+)
G105357 NA other downstream 2206926 21327192 ~ 21369204 (+)
LOC103046939 LOC107701771,LOC107725347,LOC107565259 other downstream 3134819 22255085 ~ 22283453 (+)

Expression


Co-expression Network