G104706


Basic Information

Item Value
gene id G104706
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 19147704 ~ 19150962 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU141436
tttttcatagtggAATACAATTAAATACCTTACCCAGGTTTTAATGCGGTTTGACATATCAGGCCAGTAATATCGTGCAGAAATGATGTCTGTGGTCTGTCGAATGTCATAATGATAGCCATCTTCACTAACATGCGAAGCTGTGAgaactgaagtgatctcctCTTCTGATACCAGCTCCAAGCGCATTTGTTCATCAGATGTCCCGCTTACCATCACAGTAGTTGTTCCAGGGGAAAAGCACCGGCACGGCCCCCTTCTTCAGCCTCCGTCTGCCCCCGCTCTCCTTTCGGTCTGTGATATCCTCTGGGTTAAAATGCCGGCTGCAGACCCGGGCGTTAGACTTCAGGGGGAAATTCTCCCTCCGGACGCTCACCAGCCAGTTTTTCCTCAGCTCCTCGTCCGACGGGAAGCTGTGGAAGCTGAGCTCCGTGTTGAACCTTGAAGTAGTTCCACACAGAGGAACACAGCAGTGCTCTGTGGGGAAGCCCTTCTGATAGTAGATCTTCTTGGCCATCATCGTCTGTCTGACTCGATGGCGGCTCTTTTCACAGCTGGACCACCGCGCCGAAATCTCTGCTCGATTACCGCCAGTATTTGTAATCTCAACACGCTGGTGGCTACATGTTGGAAATTGGCACGGATAACACAGTATTGGCATAGACGTTTTCCAGCAGAAATGAGTGCTTCAGTAATATCAGAGACCCTCCCCCAGGGGGAGACAGCATTGGTCTGAAACccctgatgatgatgatttggGGTGCACACAGGGGGGTGCCCTTCCAATCTACCTACACTACCCAGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141436 True 807 lncRNA 0.51 2 19147704 19150962

Neighbor

gene id symbol gene type direction distance location
LOC111193549 NA coding upstream 80217 19057398 ~ 19067487 (+)
LOC103024880 NA coding upstream 96788 19033405 ~ 19050916 (+)
LOC103033226 NA coding upstream 124783 19014406 ~ 19022921 (+)
LOC103024565 LOC108434738 coding upstream 134738 19008566 ~ 19012966 (+)
sugt1 sugt1,LOC104941757 coding upstream 252173 18860729 ~ 18895531 (+)
LOC103025512 fgf14,LOC108434733,LOC108258297,LOC105911936 coding downstream 17921 19168883 ~ 19309236 (+)
LOC103035666 LOC108434719 coding downstream 258345 19409307 ~ 19411213 (+)
LOC103025817 LOC108434731,LOC106575534,LOC106575594 coding downstream 262058 19413020 ~ 19419379 (+)
LOC103036301 pspc1,LOC108258933,LOC108434730 coding downstream 274421 19425383 ~ 19457166 (+)
LOC103036999 LOC108434729 coding downstream 331664 19482626 ~ 19532872 (+)
G104702 NA non-coding upstream 27438 19118654 ~ 19120266 (+)
G104680 NA non-coding upstream 116393 19031017 ~ 19031311 (+)
G104666 NA non-coding upstream 118339 19027152 ~ 19029365 (+)
G104667 NA non-coding upstream 121118 18998535 ~ 19026586 (+)
G104660 NA non-coding upstream 191651 18941098 ~ 18956053 (+)
G104712 NA non-coding downstream 54464 19205426 ~ 19205714 (+)
G104729 NA non-coding downstream 172046 19323008 ~ 19323230 (+)
G104798 NA non-coding downstream 383072 19534034 ~ 19534314 (+)
G104799 NA non-coding downstream 383494 19534456 ~ 19536048 (+)
G104809 fdx1,LOC108434718,LOC108259004,LOC102789999 non-coding downstream 392741 19543703 ~ 19558989 (+)
G104656 pcdh8 other upstream 224501 18919060 ~ 18923203 (+)
LOC111193547 NA other upstream 1728566 17406595 ~ 17419138 (+)
LOC103031769 prps2 other upstream 2008731 17119847 ~ 17138973 (+)
LOC103035065 nhlh2,LOC103035065,LOC108434665,LOC108258389,LOC107739819,LOC105019883 other upstream 2253112 16888386 ~ 16894592 (+)
LOC103037450 NA other upstream 2573271 16555694 ~ 16574433 (+)
nfkbiz nfkbiz other downstream 583264 19734226 ~ 19744924 (+)
G105276 NA other downstream 1838311 20989273 ~ 21055483 (+)
G105312 abcb6,abcb6a,LOC107556273,LOC107750068 other downstream 1868076 21019038 ~ 21028990 (+)
G105357 NA other downstream 2176230 21327192 ~ 21369204 (+)
LOC103046939 LOC107701771,LOC107725347,LOC107565259 other downstream 3104123 22255085 ~ 22283453 (+)

Expression


Co-expression Network