G104712


Basic Information

Item Value
gene id G104712
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 19205426 ~ 19205714 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU141444
actttacgtggatggtccattttatggccttgttgatgctcaactgacattcaactaacactgaattgaatgtccattaaatttaacttaaccctatgttgaatgtaaatgattcaaaatagaacctaaccctacacctaaccctaaccttaacccttaatcaaccctaaaatctaaccctacacctaaccctaaccttaacccttaatcaaccctaaaatctaaccctacacctaaccct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141444 True 241 lncRNA 0.37 2 19205426 19205714

Neighbor

gene id symbol gene type direction distance location
LOC111193549 NA coding upstream 137939 19057398 ~ 19067487 (+)
LOC103024880 NA coding upstream 154510 19033405 ~ 19050916 (+)
LOC103033226 NA coding upstream 182505 19014406 ~ 19022921 (+)
LOC103024565 LOC108434738 coding upstream 192460 19008566 ~ 19012966 (+)
sugt1 sugt1,LOC104941757 coding upstream 309895 18860729 ~ 18895531 (+)
LOC103035666 LOC108434719 coding downstream 203593 19409307 ~ 19411213 (+)
LOC103025817 LOC108434731,LOC106575534,LOC106575594 coding downstream 207306 19413020 ~ 19419379 (+)
LOC103036301 pspc1,LOC108258933,LOC108434730 coding downstream 219669 19425383 ~ 19457166 (+)
LOC103036999 LOC108434729 coding downstream 276912 19482626 ~ 19532872 (+)
LOC103026133 LOC108434715 coding downstream 356965 19562679 ~ 19576104 (+)
G104706 NA non-coding upstream 54464 19147704 ~ 19150962 (+)
G104702 NA non-coding upstream 85160 19118654 ~ 19120266 (+)
G104680 NA non-coding upstream 174115 19031017 ~ 19031311 (+)
G104666 NA non-coding upstream 176061 19027152 ~ 19029365 (+)
G104667 NA non-coding upstream 178840 18998535 ~ 19026586 (+)
G104729 NA non-coding downstream 117294 19323008 ~ 19323230 (+)
G104798 NA non-coding downstream 328320 19534034 ~ 19534314 (+)
G104799 NA non-coding downstream 328742 19534456 ~ 19536048 (+)
G104809 fdx1,LOC108434718,LOC108259004,LOC102789999 non-coding downstream 337989 19543703 ~ 19558989 (+)
G104811 NA non-coding downstream 354319 19560033 ~ 19560591 (+)
G104656 pcdh8 other upstream 282223 18919060 ~ 18923203 (+)
LOC111193547 NA other upstream 1786288 17406595 ~ 17419138 (+)
LOC103031769 prps2 other upstream 2066453 17119847 ~ 17138973 (+)
LOC103035065 nhlh2,LOC103035065,LOC108434665,LOC108258389,LOC107739819,LOC105019883 other upstream 2310834 16888386 ~ 16894592 (+)
LOC103037450 NA other upstream 2630993 16555694 ~ 16574433 (+)
nfkbiz nfkbiz other downstream 528512 19734226 ~ 19744924 (+)
G105276 NA other downstream 1783559 20989273 ~ 21055483 (+)
G105312 abcb6,abcb6a,LOC107556273,LOC107750068 other downstream 1813324 21019038 ~ 21028990 (+)
G105357 NA other downstream 2121478 21327192 ~ 21369204 (+)
LOC103046939 LOC107701771,LOC107725347,LOC107565259 other downstream 3049371 22255085 ~ 22283453 (+)

Expression


Co-expression Network