G105363


Basic Information

Item Value
gene id G105363
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 21210733 ~ 21210986 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU142425
TAACCCAACTTGCAACACGTAAGTAAAGTGTGGATAATCTAATGATTCAATCTAGAACAGTCTAGTGCTGTAGATCATTCAAACTCCTGTTTGCACCTCAGACCTTTTATACTTCTGTTAATATCAAAGACATCCCATAGTCCTCTTAGAACCACAGACTTTTCACAGTCCTGTTAGTGGTATAGACCGTCCACAGTCCTATAAGTGCTGTAGACCTTCTGTAGACCTGTTAAAGCCAGAGACCTTCCATTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142425 True 254 lncRNA 0.41 1 21210733 21210986

Neighbor

gene id symbol gene type direction distance location
mdh1b NA coding upstream 253700 20944945 ~ 20957033 (+)
LOC103031253 hecw2,LOC107676038,LOC108258347,LOC107674007,LOC107706834 coding upstream 301958 20860945 ~ 20908775 (+)
gtf3c3 gtf3c3,LOC107750061 coding upstream 383458 20804054 ~ 20827275 (+)
LOC103029333 LOC108437114,LOC108258365 coding upstream 410202 20783070 ~ 20800531 (+)
LOC103029654 LOC108437114,LOC108258365 coding upstream 436404 20765742 ~ 20774329 (+)
nrp2 nrp2,nrp2a,LOC107556288,LOC107750056,LOC107749808 coding downstream 206450 21417436 ~ 21561654 (+)
LOC103037976 LOC103037976,LOC108437127 coding downstream 400586 21611572 ~ 21616436 (+)
LOC103035679 NA coding downstream 715363 21926349 ~ 21934395 (+)
LOC103046323 LOC108441470 coding downstream 1102240 22313226 ~ 22480428 (+)
LOC111193458 NA coding downstream 1298460 22509446 ~ 22517576 (+)
G105311 NA non-coding upstream 195249 21013183 ~ 21015484 (+)
G105305 NA non-coding upstream 204879 21003745 ~ 21005854 (+)
G105303 NA non-coding upstream 206095 21000139 ~ 21004638 (+)
G105300 cnppd1,LOC107549439,LOC107676054,LOC107750058 non-coding upstream 211360 20995759 ~ 20999373 (+)
G105270 NA non-coding upstream 301448 20871791 ~ 20909285 (+)
G105409 NA non-coding downstream 380856 21591842 ~ 21592052 (+)
G105456 NA non-coding downstream 456866 21667852 ~ 21668149 (+)
G105470 NA non-coding downstream 616838 21827824 ~ 21833705 (+)
G105479 NA non-coding downstream 686990 21897976 ~ 21900325 (+)
G105484 NA non-coding downstream 707002 21917988 ~ 21920210 (+)
G105276 NA other upstream 155250 20989273 ~ 21055483 (+)
G105312 abcb6,abcb6a,LOC107556273,LOC107750068 other upstream 181743 21019038 ~ 21028990 (+)
nfkbiz nfkbiz other upstream 1465809 19734226 ~ 19744924 (+)
G104656 pcdh8 other upstream 2287530 18919060 ~ 18923203 (+)
LOC111193547 NA other upstream 3791595 17406595 ~ 17419138 (+)
G105357 NA other downstream 116206 21327192 ~ 21369204 (+)
LOC103046939 LOC107701771,LOC107725347,LOC107565259 other downstream 1044099 22255085 ~ 22283453 (+)
LOC103045705 LOC107725350,LOC107692700,LOC108439093,LOC107565240,LOC108441473 other downstream 1314271 22525257 ~ 22588961 (+)
LOC103038624 zgc:77849,LOC103038624,LOC108439082,LOC107722949,LOC107692663,LOC107590708,LOC107564565 other downstream 1599093 22810079 ~ 22820096 (+)
G106017 si:ch73-12o23.1,LOC108439175,LOC108258846,LOC107722961,LOC107590719 other downstream 2704649 23915635 ~ 23923771 (+)

Expression


Co-expression Network