G106146


Basic Information

Item Value
gene id G106146
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 24411208 ~ 24413098 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU143375
TACTATTATGCTGGTTTCATGTGCTTCAGGCTGTACACCGGTGGCTTATTAGGCGTGATGGAGGTCACTTGAACACTTCAGCTAGAAATATGGTGATTAAAGGCATGGTGTCCTTAAAACAATGCACGAGTGCAGAAGAGTTCCAGAAAATGTCAGAGGACCTGCTTGCAAGaatagaaacagaaacacagagcacTCAAGTCTGTGATTACCTTCGCAAGAATTGGCTGACAAATGCAGAAATGTGGTCCAATTTTGGACGTTTGTTTTATCACCACCAAAGTGAAACAAACAATGTCGTTGAGAGATTTTTCCTAGGCCTCAAGTACGGTTTCTTCTGTGGCTATTCAAACAAAAGAGTTGACGATCTTCTCCGTTTGCTGAATGATGACGTTGTGCCGTACTACAAGCATTTGGGAGATCTGCAGGCTGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143375 True 435 TUCP 0.43 5 24411208 24413098

Neighbor

gene id symbol gene type direction distance location
gpc6 LOC108414264,LOC105911916,LOC107730398,LOC101477426,LOC100710496,LOC107744956 coding upstream 295747 23970691 ~ 24115461 (+)
LOC103035907 NA coding upstream 772320 23632379 ~ 23638888 (+)
chtf18 chtf18,LOC107725360 coding upstream 858510 23524716 ~ 23552698 (+)
plk1 plk1,LOC107722962 coding upstream 921003 23480456 ~ 23490205 (+)
LOC107197111 NA coding upstream 951693 23454456 ~ 23459515 (+)
slitrk6 slitrk6,LOC107674010,LOC107730399,LOC107558904,LOC107737039,LOC107574216,LOC107698122 coding downstream 663838 25076936 ~ 25102573 (+)
LOC103022503 NA coding downstream 959708 25372806 ~ 25374832 (+)
LOC103023109 NA coding downstream 969774 25382872 ~ 25386300 (+)
LOC111193564 NA coding downstream 1006442 25419540 ~ 25422258 (+)
LOC103025458 NA coding downstream 1010614 25423712 ~ 25449279 (+)
G106101 NA non-coding upstream 290004 24120972 ~ 24121204 (+)
G106026 NA non-coding upstream 290713 24119780 ~ 24120495 (+)
G106054 NA non-coding upstream 370491 24040262 ~ 24040717 (+)
G106023 NA non-coding upstream 389974 23938395 ~ 24021234 (+)
G106038 NA non-coding upstream 407638 23999351 ~ 24003570 (+)
G106155 NA non-coding downstream 94914 24508012 ~ 24508429 (+)
G106157 NA non-coding downstream 95444 24508542 ~ 24509393 (+)
G106172 NA non-coding downstream 124463 24537561 ~ 24537817 (+)
G106195 NA non-coding downstream 303439 24716537 ~ 24716804 (+)
G106205 NA non-coding downstream 384770 24797868 ~ 24798201 (+)
G106036 NA other upstream 421616 23987207 ~ 23989592 (+)
G106017 si:ch73-12o23.1,LOC108439175,LOC108258846,LOC107722961,LOC107590719 other upstream 487437 23915635 ~ 23923771 (+)
LOC103038624 zgc:77849,LOC103038624,LOC108439082,LOC107722949,LOC107692663,LOC107590708,LOC107564565 other upstream 1591112 22810079 ~ 22820096 (+)
LOC103045705 LOC107725350,LOC107692700,LOC108439093,LOC107565240,LOC108441473 other upstream 1822247 22525257 ~ 22588961 (+)
LOC103046939 LOC107701771,LOC107725347,LOC107565259 other upstream 2127755 22255085 ~ 22283453 (+)
LOC111193563 NA other downstream 948646 25361744 ~ 25369439 (+)
LOC111193565 NA other downstream 1045717 25458815 ~ 25570821 (+)
LOC103037236 NA other downstream 1741319 26154417 ~ 26171801 (+)
G106661 lancl1 other downstream 3601418 28014516 ~ 28022047 (+)
G106673 NA other downstream 3653254 28066352 ~ 28066983 (+)

Expression


Co-expression Network