G106250


Basic Information

Item Value
gene id G106250
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 25213203 ~ 25213469 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU143493
gagtgcagtgtgtgtggtgtgaaaattgtattcctttagctagacctctgccataaagacaaaacatctaagcattttgacttgcagtacttacacaatgccaaagggacaatgcattttgggggcactgatgatttgtgtgagaaaggaaatcagttttgacacgtgggtaaactgtttttggagcgatatgagcagtgatgaggatccatgtagttttgctgcaccgtccagtttattttgacagatggacaaaattaatgaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143493 True 267 lncRNA 0.40 1 25213203 25213469

Neighbor

gene id symbol gene type direction distance location
slitrk6 slitrk6,LOC107674010,LOC107730399,LOC107558904,LOC107737039,LOC107574216,LOC107698122 coding upstream 110630 25076936 ~ 25102573 (+)
gpc6 LOC108414264,LOC105911916,LOC107730398,LOC101477426,LOC100710496,LOC107744956 coding upstream 1097742 23970691 ~ 24115461 (+)
LOC103035907 NA coding upstream 1574315 23632379 ~ 23638888 (+)
chtf18 chtf18,LOC107725360 coding upstream 1660505 23524716 ~ 23552698 (+)
plk1 plk1,LOC107722962 coding upstream 1722998 23480456 ~ 23490205 (+)
LOC103022503 NA coding downstream 159337 25372806 ~ 25374832 (+)
LOC103023109 NA coding downstream 169403 25382872 ~ 25386300 (+)
LOC111193564 NA coding downstream 206071 25419540 ~ 25422258 (+)
LOC103025458 NA coding downstream 210243 25423712 ~ 25449279 (+)
LOC111193460 NA coding downstream 271374 25484843 ~ 25519366 (+)
G106248 NA non-coding upstream 1127 25211579 ~ 25212076 (+)
G106220 NA non-coding upstream 304174 24908744 ~ 24909029 (+)
G106217 NA non-coding upstream 305272 24907148 ~ 24907931 (+)
G106205 NA non-coding upstream 415002 24797868 ~ 24798201 (+)
G106195 NA non-coding upstream 496399 24716537 ~ 24716804 (+)
G106255 NA non-coding downstream 146616 25360085 ~ 25402912 (+)
LOC103043670 NA non-coding downstream 187448 25400917 ~ 25401805 (+)
G106274 NA non-coding downstream 238668 25452137 ~ 25542268 (+)
G106273 NA non-coding downstream 242651 25456120 ~ 25548983 (+)
G106277 NA non-coding downstream 291337 25504806 ~ 25530624 (+)
G106146 NA other upstream 800105 24411208 ~ 24413098 (+)
G106036 NA other upstream 1223611 23987207 ~ 23989592 (+)
G106017 si:ch73-12o23.1,LOC108439175,LOC108258846,LOC107722961,LOC107590719 other upstream 1289432 23915635 ~ 23923771 (+)
LOC103038624 zgc:77849,LOC103038624,LOC108439082,LOC107722949,LOC107692663,LOC107590708,LOC107564565 other upstream 2393107 22810079 ~ 22820096 (+)
LOC103045705 LOC107725350,LOC107692700,LOC108439093,LOC107565240,LOC108441473 other upstream 2624242 22525257 ~ 22588961 (+)
LOC111193563 NA other downstream 148275 25361744 ~ 25369439 (+)
LOC111193565 NA other downstream 245346 25458815 ~ 25570821 (+)
LOC103037236 NA other downstream 940948 26154417 ~ 26171801 (+)
G106661 lancl1 other downstream 2801047 28014516 ~ 28022047 (+)
G106673 NA other downstream 2852883 28066352 ~ 28066983 (+)

Expression


Co-expression Network