G106446


Basic Information

Item Value
gene id G106446
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 26223136 ~ 26228689 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU143794
GGTGGTCTGTAACAGCCAACAACAGTGAGGTTGACGCCTTTAGAAAGATGTATTTTTACAGCAAGTATCTCAAACTGTTTGGCTTTGGTTATTGATTGAAGCATGGAGCTACAAAATTTAGACTTGATGTAGATTGCAACTCCTCCACCTTTACCAACTCTATCCGATCTATAGACATTATAGCCCTCAATTGAAATCAGATCATCAGGTACAGATTTTTTCAACCATGTTTCAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143794 True 237 lncRNA 0.38 2 26223136 26228689

Neighbor

gene id symbol gene type direction distance location
LOC103039357 NA coding upstream 29992 26188965 ~ 26193144 (+)
LOC111193484 NA coding upstream 144337 26075698 ~ 26078799 (+)
LOC103038099 erbb4,LOC108441681,LOC108440448,LOC101079286 coding upstream 199463 25763847 ~ 26023673 (+)
ube2f ube2f,LOC107725407,LOC107674019,LOC107556276,LOC107707607,LOC107566887 coding upstream 463493 25740227 ~ 25759643 (+)
LOC111193460 NA coding upstream 703770 25484843 ~ 25519366 (+)
LOC103039973 NA coding downstream 16550 26245239 ~ 26248347 (+)
LOC111193566 NA coding downstream 21484 26250173 ~ 26254877 (+)
slitrk1 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 coding downstream 282432 26511121 ~ 26515238 (+)
LOC111193487 NA coding downstream 410278 26638967 ~ 26643210 (+)
atic atic,pur9,LOC107556291,LOC107674004,LOC107750210 coding downstream 1359360 27588049 ~ 27604231 (+)
G106380 NA non-coding upstream 192454 26026244 ~ 26030682 (+)
G106391 NA non-coding upstream 262687 25954937 ~ 25960449 (+)
G106370 NA non-coding upstream 512680 25710216 ~ 25710456 (+)
G106289 NA non-coding upstream 656710 25563594 ~ 25566426 (+)
G106275 NA non-coding upstream 663108 25558581 ~ 25560028 (+)
G106466 NA non-coding downstream 56203 26284892 ~ 26285416 (+)
G106476 NA non-coding downstream 81040 26309729 ~ 26309982 (+)
G106486 NA non-coding downstream 223519 26452208 ~ 26452448 (+)
G106541 NA non-coding downstream 540925 26769614 ~ 26769877 (+)
LOC111193569 NA non-coding downstream 559751 26788440 ~ 26789793 (+)
LOC103037236 NA other upstream 51335 26154417 ~ 26171801 (+)
LOC111193565 NA other upstream 652315 25458815 ~ 25570821 (+)
LOC111193563 NA other upstream 853697 25361744 ~ 25369439 (+)
G106146 NA other upstream 1810038 24411208 ~ 24413098 (+)
G106036 NA other upstream 2233544 23987207 ~ 23989592 (+)
G106661 lancl1 other downstream 1785827 28014516 ~ 28022047 (+)
G106673 NA other downstream 1837663 28066352 ~ 28066983 (+)
LOC103027743 NA other downstream 2474378 28703067 ~ 28724026 (+)
LOC111193573 NA other downstream 2920376 29149065 ~ 29159680 (+)
G107117 NA other downstream 3551637 29780326 ~ 29780927 (+)

Expression


Co-expression Network