Gene
RNA
| Item | Value |
|---|---|
| gene id | G106557 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035908.1 |
| NCBI id | CM008311.1 |
| chromosome length | 31403898 |
| location | 27571336 ~ 27571646 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU143930 | True | 311 | lncRNA | 0.34 | 1 | 27571336 | 27571646 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC111193487 | NA | coding | upstream | 928126 | 26638967 ~ 26643210 (+) |
| slitrk1 | slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 | coding | upstream | 1056098 | 26511121 ~ 26515238 (+) |
| LOC111193566 | NA | coding | upstream | 1316459 | 26250173 ~ 26254877 (+) |
| LOC103039973 | NA | coding | upstream | 1322989 | 26245239 ~ 26248347 (+) |
| LOC103039357 | NA | coding | upstream | 1378192 | 26188965 ~ 26193144 (+) |
| atic | atic,pur9,LOC107556291,LOC107674004,LOC107750210 | coding | downstream | 16403 | 27588049 ~ 27604231 (+) |
| LOC103046391 | NA | coding | downstream | 157867 | 27729513 ~ 27739098 (+) |
| LOC111193461 | cpo,LOC108258336 | coding | downstream | 173442 | 27745088 ~ 27758097 (+) |
| arglu1 | NA | coding | downstream | 187566 | 27759212 ~ 27768267 (+) |
| LOC103047315 | LOC108440455 | coding | downstream | 230438 | 27802084 ~ 27808084 (+) |
| G106555 | NA | non-coding | upstream | 1145 | 27569987 ~ 27570191 (+) |
| LOC111193569 | NA | non-coding | upstream | 781543 | 26788440 ~ 26789793 (+) |
| G106541 | NA | non-coding | upstream | 801459 | 26769614 ~ 26769877 (+) |
| G106486 | NA | non-coding | upstream | 1118888 | 26452208 ~ 26452448 (+) |
| G106476 | NA | non-coding | upstream | 1261354 | 26309729 ~ 26309982 (+) |
| G106562 | NA | non-coding | downstream | 11731 | 27583377 ~ 27624701 (+) |
| G106564 | NA | non-coding | downstream | 37735 | 27609381 ~ 27610614 (+) |
| G106572 | NA | non-coding | downstream | 59297 | 27630943 ~ 27634210 (+) |
| G106636 | NA | non-coding | downstream | 254941 | 27826587 ~ 27826848 (+) |
| G106644 | NA | non-coding | downstream | 334139 | 27905785 ~ 27906285 (+) |
| LOC103037236 | NA | other | upstream | 1399535 | 26154417 ~ 26171801 (+) |
| LOC111193565 | NA | other | upstream | 2000515 | 25458815 ~ 25570821 (+) |
| LOC111193563 | NA | other | upstream | 2201897 | 25361744 ~ 25369439 (+) |
| G106146 | NA | other | upstream | 3158238 | 24411208 ~ 24413098 (+) |
| G106036 | NA | other | upstream | 3581744 | 23987207 ~ 23989592 (+) |
| G106661 | lancl1 | other | downstream | 442870 | 28014516 ~ 28022047 (+) |
| G106673 | NA | other | downstream | 494706 | 28066352 ~ 28066983 (+) |
| LOC103027743 | NA | other | downstream | 1131421 | 28703067 ~ 28724026 (+) |
| LOC111193573 | NA | other | downstream | 1577419 | 29149065 ~ 29159680 (+) |
| G107117 | NA | other | downstream | 2208680 | 29780326 ~ 29780927 (+) |
