G106648


Basic Information

Item Value
gene id G106648
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 27912306 ~ 27914261 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU144070
cagcaggacttggcacactgccaaaaatagatcacactgtgtgtaatacatctatatatgagtttcacgttttcaactgaattactgaactaaAGTAACTTTTCTTTTCTACACAATGTAATCACATGAATGCAgctaaaagagcagaaactgtatttCTGGGCTGTATTAGCTCAGCAATATTGGCAGCAAGTTTACTAAACCAAGAAGGGTTCGTAATAAATGAGCATGATGGCATCTGTGGGAgttgaaataaacaaatattgatAACGGAATGTGTGATACCACGCTCATTTATCCTAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144070 True 305 lncRNA 0.36 2 27912306 27914261

Neighbor

gene id symbol gene type direction distance location
LOC103043862 mx1 coding upstream 6661 27890718 ~ 27905645 (+)
LOC103047315 LOC108440455 coding upstream 104222 27802084 ~ 27808084 (+)
arglu1 NA coding upstream 144039 27759212 ~ 27768267 (+)
LOC111193461 cpo,LOC108258336 coding upstream 154209 27745088 ~ 27758097 (+)
LOC103046391 NA coding upstream 173208 27729513 ~ 27739098 (+)
LOC111193463 NA coding downstream 79738 27993999 ~ 27999852 (+)
LOC111193464 NA coding downstream 775294 28689555 ~ 28692305 (+)
LOC111193465 NA coding downstream 778583 28692844 ~ 28697096 (+)
LOC111193466 NA coding downstream 787751 28702012 ~ 28702921 (+)
LOC111193571 NA coding downstream 871703 28785964 ~ 28791991 (+)
G106646 NA non-coding upstream 5095 27906956 ~ 27907211 (+)
G106644 NA non-coding upstream 6021 27905785 ~ 27906285 (+)
G106636 NA non-coding upstream 85458 27826587 ~ 27826848 (+)
G106572 NA non-coding upstream 278096 27630943 ~ 27634210 (+)
G106562 NA non-coding upstream 287605 27583377 ~ 27624701 (+)
G106642 NA non-coding downstream 1286 27915547 ~ 27918196 (+)
G106650 NA non-coding downstream 11999 27926260 ~ 27936905 (+)
G106651 NA non-coding downstream 22949 27937210 ~ 27975192 (+)
G106674 NA non-coding downstream 193852 28108113 ~ 28111177 (+)
G106675 NA non-coding downstream 198216 28112477 ~ 28132272 (+)
LOC103037236 NA other upstream 1740505 26154417 ~ 26171801 (+)
LOC111193565 NA other upstream 2341485 25458815 ~ 25570821 (+)
LOC111193563 NA other upstream 2542867 25361744 ~ 25369439 (+)
G106146 NA other upstream 3499208 24411208 ~ 24413098 (+)
G106036 NA other upstream 3922714 23987207 ~ 23989592 (+)
G106661 lancl1 other downstream 100255 28014516 ~ 28022047 (+)
G106673 NA other downstream 152091 28066352 ~ 28066983 (+)
LOC103027743 NA other downstream 788806 28703067 ~ 28724026 (+)
LOC111193573 NA other downstream 1234804 29149065 ~ 29159680 (+)
G107117 NA other downstream 1866065 29780326 ~ 29780927 (+)

Expression


Co-expression Network