G106673


Basic Information

Item Value
gene id G106673
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 28066352 ~ 28066983 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU144107
caatatgcattaaaccaaaatttgaccggtgcaaaagtatgggcacccttatcattttattaatttgaatactcctaactactttttactgacttactgaagcacaaaattggtttggtaaccccattgagctttgaacttcatagccaggtgtatccaatcatgagaaaaggtatttaaggtggccaattgcaagttgttctcctatttgaatctcctctgaagagtggcatcatgggctcatcaaaacaactctcaaatgatctaaaaacaaagattgttcaacatagttgttcaggggaaggatacaaaaagttgtctcagagatttaacctgtcagtttccactgtgaggaacatagtaaggaaatggaagaccacagggacagttcttgttaagcccagaagtggcaggccaagaaaaatatcagaaaggcagagaagaagaatggtgagaacagtcaagcacaatccacagaccacctccaaagagctgcagcatcatcttgctgcagatggtgtcactgtgcatcggtcaacaatacagcacactttgcacaaggagaagctgtatgggagagtgatgcgaaagaagccatttctgcgagcacgccacaaacagagtcgcctgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144107 True 632 TUCP 0.42 1 28066352 28066983

Neighbor

gene id symbol gene type direction distance location
LOC111193463 NA coding upstream 66500 27993999 ~ 27999852 (+)
LOC103043862 mx1 coding upstream 160707 27890718 ~ 27905645 (+)
LOC103047315 LOC108440455 coding upstream 258268 27802084 ~ 27808084 (+)
arglu1 NA coding upstream 298085 27759212 ~ 27768267 (+)
LOC111193461 cpo,LOC108258336 coding upstream 308255 27745088 ~ 27758097 (+)
LOC111193464 NA coding downstream 622572 28689555 ~ 28692305 (+)
LOC111193465 NA coding downstream 625861 28692844 ~ 28697096 (+)
LOC111193466 NA coding downstream 635029 28702012 ~ 28702921 (+)
LOC111193571 NA coding downstream 718981 28785964 ~ 28791991 (+)
LOC111193468 NA coding downstream 744841 28811824 ~ 28815508 (+)
G106651 NA non-coding upstream 91160 27937210 ~ 27975192 (+)
G106650 NA non-coding upstream 129447 27926260 ~ 27936905 (+)
G106642 NA non-coding upstream 148156 27915547 ~ 27918196 (+)
G106648 NA non-coding upstream 152091 27912306 ~ 27914261 (+)
G106646 NA non-coding upstream 159141 27906956 ~ 27907211 (+)
G106674 NA non-coding downstream 41130 28108113 ~ 28111177 (+)
G106675 NA non-coding downstream 45494 28112477 ~ 28132272 (+)
G106710 NA non-coding downstream 232605 28299588 ~ 28300251 (+)
G106718 NA non-coding downstream 318495 28385478 ~ 28386442 (+)
G106745 NA non-coding downstream 511228 28578211 ~ 28578489 (+)
G106661 lancl1 other upstream 44305 28014516 ~ 28022047 (+)
LOC103037236 NA other upstream 1894551 26154417 ~ 26171801 (+)
LOC111193565 NA other upstream 2495531 25458815 ~ 25570821 (+)
LOC111193563 NA other upstream 2696913 25361744 ~ 25369439 (+)
G106146 NA other upstream 3653254 24411208 ~ 24413098 (+)
LOC103027743 NA other downstream 636084 28703067 ~ 28724026 (+)
LOC111193573 NA other downstream 1082082 29149065 ~ 29159680 (+)
G107117 NA other downstream 1713343 29780326 ~ 29780927 (+)

Expression


Co-expression Network