G106710


Basic Information

Item Value
gene id G106710
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 28299588 ~ 28300251 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU144148
tctttggcccgtttttctgcactagaaatgcgcactctctccgcttttagactcttttgccccgtttttctgcgctagaaatgcgcactctctccacttttagactctttggcccgtttctgacacctagcgttcaaactttgaatctcacattataaaaacctgcttaacagcgggccaactttcattctatttctaaaataccttgcgggccgctccaaaaaagg
>TU144150
tctccgcttttagactctttggcccgtttttctgcgctagaaatgcgcactctctccacttttagactcttttgccccgtttttctgcgctagaaatgcgcactccctctccgcttttagactcttttgccccgtttttctgcgctagaaatgcgcactctctccacttttagactctttggcccgtttctgacacctagcgttcaaactttgaatctcacattataaaaacctgcttaacagcgggccaactttcattctatttctaaaataccttgcgggccgctccaaaaaagg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144148 False 227 lncRNA 0.45 2 28299816 28300251
TU144150 True 297 lncRNA 0.46 2 28299588 28300251

Neighbor

gene id symbol gene type direction distance location
LOC111193463 NA coding upstream 299736 27993999 ~ 27999852 (+)
LOC103043862 mx1 coding upstream 393943 27890718 ~ 27905645 (+)
LOC103047315 LOC108440455 coding upstream 491504 27802084 ~ 27808084 (+)
arglu1 NA coding upstream 531321 27759212 ~ 27768267 (+)
LOC111193461 cpo,LOC108258336 coding upstream 541491 27745088 ~ 27758097 (+)
LOC111193464 NA coding downstream 389304 28689555 ~ 28692305 (+)
LOC111193465 NA coding downstream 392593 28692844 ~ 28697096 (+)
LOC111193466 NA coding downstream 401761 28702012 ~ 28702921 (+)
LOC111193571 NA coding downstream 485713 28785964 ~ 28791991 (+)
LOC111193468 NA coding downstream 511573 28811824 ~ 28815508 (+)
G106675 NA non-coding upstream 167316 28112477 ~ 28132272 (+)
G106674 NA non-coding upstream 188411 28108113 ~ 28111177 (+)
G106651 NA non-coding upstream 324396 27937210 ~ 27975192 (+)
G106650 NA non-coding upstream 362683 27926260 ~ 27936905 (+)
G106642 NA non-coding upstream 381392 27915547 ~ 27918196 (+)
G106718 NA non-coding downstream 85227 28385478 ~ 28386442 (+)
G106745 NA non-coding downstream 277960 28578211 ~ 28578489 (+)
G106754 NA non-coding downstream 323720 28623971 ~ 28624198 (+)
G106760 NA non-coding downstream 366863 28667114 ~ 28673936 (+)
G106791 NA non-coding downstream 426469 28726720 ~ 28727094 (+)
G106673 NA other upstream 232605 28066352 ~ 28066983 (+)
G106661 lancl1 other upstream 277541 28014516 ~ 28022047 (+)
LOC103037236 NA other upstream 2127787 26154417 ~ 26171801 (+)
LOC111193565 NA other upstream 2728767 25458815 ~ 25570821 (+)
LOC111193563 NA other upstream 2930149 25361744 ~ 25369439 (+)
LOC103027743 NA other downstream 402816 28703067 ~ 28724026 (+)
LOC111193573 NA other downstream 848814 29149065 ~ 29159680 (+)
G107117 NA other downstream 1480075 29780326 ~ 29780927 (+)

Expression


Co-expression Network