G106795


Basic Information

Item Value
gene id G106795
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 28734295 ~ 28734971 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU144292
tCACAGCATGTAataattctcctaattaattatgggtgtgtttgggatgtaaggtaaaataaatcaataaagaaATCAGTGTCTCTTTGCATtcccctttaagagccagatgcactctgactttggcacattgctaATTCAGGAGCGCAGCTACCTGCACGTGTCcggcgcttctcagcagaggaaactgacctgctatTGATCTAAACACGctccattgctatttaaataacACAGGCAGGAGGTGTGAAAATCGATGGTGTTAGATAGCAATGATAGCAAGCGCAATGCCCCTTGAACAGGGTGTAAGGCCAAATTTAACTCAGCAGCATCAGACGCACCGATACATTACATAAGTCCCTTAAAAGTCCCTTAGATTAAGAGTTTTTGTATTAGATTCAGGTCTAGGGAATGGTATTAATGGCTTTATCGTCCAGGAACTTGCCTACAAGACTTTATCTCAGTGTCTAACAGCATTAAGGCTTGCTGGCTAATGAATGAAGCTTTGTACAATTTTCCTCCCCAAGATATGCCTCTCTTGAACATCCCTGACCCATTGCAGGCAGCATGATATTCACCACAGCAACACgtctgcagaggtggaaaaagtactgaaaaattgttactaagtaaaagtacctttactttgctaaaattctactcaagtaaaagtaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144292 True 677 lncRNA 0.41 1 28734295 28734971

Neighbor

gene id symbol gene type direction distance location
LOC111193466 NA coding upstream 31374 28702012 ~ 28702921 (+)
LOC111193465 NA coding upstream 37199 28692844 ~ 28697096 (+)
LOC111193464 NA coding upstream 41990 28689555 ~ 28692305 (+)
LOC111193463 NA coding upstream 734443 27993999 ~ 27999852 (+)
LOC103043862 mx1 coding upstream 828650 27890718 ~ 27905645 (+)
LOC111193571 NA coding downstream 50993 28785964 ~ 28791991 (+)
LOC111193468 NA coding downstream 76853 28811824 ~ 28815508 (+)
LOC111193570 NA coding downstream 106208 28841179 ~ 28865225 (+)
LOC111193469 NA coding downstream 390902 29125873 ~ 29127641 (+)
LOC103024513 LOC107555266,LOC106574727,LOC106575573,LOC108429863,LOC107568777,LOC107709315,LOC107718016,LOC105889574,LOC100333907 coding downstream 473580 29208551 ~ 29241597 (+)
G106792 NA non-coding upstream 6575 28727286 ~ 28727720 (+)
G106791 NA non-coding upstream 7201 28726720 ~ 28727094 (+)
G106760 NA non-coding upstream 60359 28667114 ~ 28673936 (+)
G106754 NA non-coding upstream 110097 28623971 ~ 28624198 (+)
G106745 NA non-coding upstream 155806 28578211 ~ 28578489 (+)
G106799 NA non-coding downstream 41575 28776546 ~ 28777037 (+)
G106800 NA non-coding downstream 43211 28778182 ~ 28778480 (+)
G106803 NA non-coding downstream 74364 28809335 ~ 28865069 (+)
LOC111193572 NA non-coding downstream 78434 28813405 ~ 28814051 (+)
G106807 NA non-coding downstream 94328 28829299 ~ 28850608 (+)
LOC103027743 NA other upstream 10269 28703067 ~ 28724026 (+)
G106673 NA other upstream 667312 28066352 ~ 28066983 (+)
G106661 lancl1 other upstream 712248 28014516 ~ 28022047 (+)
LOC103037236 NA other upstream 2562494 26154417 ~ 26171801 (+)
LOC111193565 NA other upstream 3163474 25458815 ~ 25570821 (+)
LOC111193573 NA other downstream 414094 29149065 ~ 29159680 (+)
G107117 NA other downstream 1045355 29780326 ~ 29780927 (+)

Expression


Co-expression Network