G107044


Basic Information

Item Value
gene id G107044
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 29525655 ~ 29575347 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU144637
tccagggtaatgtcagcataccaccaagaaggaccaaccacatccaacaggattaactgtggacgctgtaggaggaagctgtctgaaagggatgttcgggtgctaacccggattgtatccaaaaaacataaaaccacggctgatcaaatcacgcagaattcaatgtgctcctcaactctcctgtttcaaccagaactgtccgtcaccacaatcaattattgtggtctaaaaccaggtgtttcagtttcattgtccaaccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144637 True 260 lncRNA 0.46 2 29525655 29575347

Neighbor

gene id symbol gene type direction distance location
LOC103025657 runx1,LOC108429862,LOC107571884 coding upstream 5821 29417222 ~ 29519834 (+)
LOC103024513 LOC107555266,LOC106574727,LOC106575573,LOC108429863,LOC107568777,LOC107709315,LOC107718016,LOC105889574,LOC100333907 coding upstream 284058 29208551 ~ 29241597 (+)
LOC111193469 NA coding upstream 398014 29125873 ~ 29127641 (+)
LOC111193570 NA coding upstream 660430 28841179 ~ 28865225 (+)
LOC111193468 NA coding upstream 710147 28811824 ~ 28815508 (+)
LOC111193470 NA coding downstream 81190 29656537 ~ 29658422 (+)
ncam2 ncam2,LOC107721821,LOC107698913,LOC107751079 coding downstream 268753 29844100 ~ 30451601 (+)
LOC111193471 NA coding downstream 964914 30540261 ~ 30547361 (+)
LOC111193577 LOC108429857,LOC108258902 coding downstream 1086652 30661999 ~ 30668744 (+)
gart gart coding downstream 1096805 30672152 ~ 30711252 (+)
G107014 NA non-coding upstream 119346 29405988 ~ 29406309 (+)
G107012 NA non-coding upstream 121387 29403886 ~ 29404268 (+)
G106993 NA non-coding upstream 157974 29367366 ~ 29367681 (+)
G106992 NA non-coding upstream 158485 29366686 ~ 29367170 (+)
G106954 NA non-coding upstream 202308 29322545 ~ 29323347 (+)
G107056 NA non-coding downstream 19691 29595038 ~ 29597014 (+)
G107057 NA non-coding downstream 21911 29597258 ~ 29600584 (+)
G107064 NA non-coding downstream 39931 29615278 ~ 29621512 (+)
G107074 NA non-coding downstream 80564 29655911 ~ 29656234 (+)
G107075 NA non-coding downstream 98749 29674096 ~ 29674334 (+)
LOC111193573 NA other upstream 365975 29149065 ~ 29159680 (+)
LOC103027743 NA other upstream 801629 28703067 ~ 28724026 (+)
G106673 NA other upstream 1458672 28066352 ~ 28066983 (+)
G106661 lancl1 other upstream 1503608 28014516 ~ 28022047 (+)
LOC103037236 NA other upstream 3353854 26154417 ~ 26171801 (+)
G107117 NA other downstream 204979 29780326 ~ 29780927 (+)

Expression


Co-expression Network