G107074


Basic Information

Item Value
gene id G107074
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 29655911 ~ 29656234 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU144685
AGAAGTCTCGGGCTCACCTCGTCAGGTCCAGCTGATTTCCCTGAGCGGAGTCTCCTCAGCGCCCCTGTGACCTGGTCTGCAGAGAGGTGGAGGGGGGAGGTGAGGGGGGGCGGACTGGATGTGCTGACAGTCTGTGAGAGGGAGACCTGAGCAGCACTCAGAAGAGGTAGGGAGGTGTCCAGTGGGGCAGAGGCTGAGGTTGCTGAGATAGCAggacagacagaagcaggtgaggatGAAACAGGGCAATCAAACCAGTTATAGAAGAGATTGAGTTCGTTCGCTCTCTCCACACCACCAGCTGTTGCACTATCACTCTTTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144685 True 324 lncRNA 0.57 1 29655911 29656234

Neighbor

gene id symbol gene type direction distance location
LOC103025432 NA coding upstream 67789 29563196 ~ 29588122 (+)
donson LOC107555241 coding upstream 97868 29538337 ~ 29558043 (+)
LOC103025657 runx1,LOC108429862,LOC107571884 coding upstream 136077 29417222 ~ 29519834 (+)
LOC103024513 LOC107555266,LOC106574727,LOC106575573,LOC108429863,LOC107568777,LOC107709315,LOC107718016,LOC105889574,LOC100333907 coding upstream 414314 29208551 ~ 29241597 (+)
LOC111193469 NA coding upstream 528270 29125873 ~ 29127641 (+)
LOC111193470 NA coding downstream 303 29656537 ~ 29658422 (+)
ncam2 ncam2,LOC107721821,LOC107698913,LOC107751079 coding downstream 187866 29844100 ~ 30451601 (+)
LOC111193471 NA coding downstream 884027 30540261 ~ 30547361 (+)
LOC111193577 LOC108429857,LOC108258902 coding downstream 1005765 30661999 ~ 30668744 (+)
gart gart coding downstream 1015918 30672152 ~ 30711252 (+)
G107064 NA non-coding upstream 34399 29615278 ~ 29621512 (+)
G107057 NA non-coding upstream 55327 29597258 ~ 29600584 (+)
G107056 NA non-coding upstream 58897 29595038 ~ 29597014 (+)
G107044 NA non-coding upstream 80564 29525655 ~ 29575347 (+)
G107014 NA non-coding upstream 249602 29405988 ~ 29406309 (+)
G107075 NA non-coding downstream 17862 29674096 ~ 29674334 (+)
G107094 NA non-coding downstream 27852 29684086 ~ 29684364 (+)
G107096 NA non-coding downstream 40468 29696702 ~ 29698661 (+)
G107104 NA non-coding downstream 61938 29718172 ~ 29718407 (+)
G107106 NA non-coding downstream 64392 29720626 ~ 29720867 (+)
LOC111193573 NA other upstream 496231 29149065 ~ 29159680 (+)
LOC103027743 NA other upstream 931885 28703067 ~ 28724026 (+)
G106673 NA other upstream 1588928 28066352 ~ 28066983 (+)
G106661 lancl1 other upstream 1633864 28014516 ~ 28022047 (+)
LOC103037236 NA other upstream 3484110 26154417 ~ 26171801 (+)
G107117 NA other downstream 124092 29780326 ~ 29780927 (+)

Expression


Co-expression Network