G107094


Basic Information

Item Value
gene id G107094
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 29684086 ~ 29684364 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU144728
atccctttcagacagcttcctcttacagcgtccacagttaatcctgttggatgtggttggtccttcttggtggtatgctgacattaccctggataccgtggctcttgatgcatcacaaagacttgctgtcttggtcacagatgctccagcaagacgtgcaccaacaatttgtccacttttgaactctggtatgtctcccataatgttgtgtgcattgcaatatttagagcagaactgtgctcttaccctgctaattgaaccttcacactctgctcttac

Function

NR:

description
uncharacterized protein LOC105358166, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144728 True 279 lncRNA 0.46 1 29684086 29684364

Neighbor

gene id symbol gene type direction distance location
LOC111193470 NA coding upstream 25664 29656537 ~ 29658422 (+)
LOC103025432 NA coding upstream 95964 29563196 ~ 29588122 (+)
donson LOC107555241 coding upstream 126043 29538337 ~ 29558043 (+)
LOC103025657 runx1,LOC108429862,LOC107571884 coding upstream 164252 29417222 ~ 29519834 (+)
LOC103024513 LOC107555266,LOC106574727,LOC106575573,LOC108429863,LOC107568777,LOC107709315,LOC107718016,LOC105889574,LOC100333907 coding upstream 442489 29208551 ~ 29241597 (+)
ncam2 ncam2,LOC107721821,LOC107698913,LOC107751079 coding downstream 159736 29844100 ~ 30451601 (+)
LOC111193471 NA coding downstream 855897 30540261 ~ 30547361 (+)
LOC111193577 LOC108429857,LOC108258902 coding downstream 977635 30661999 ~ 30668744 (+)
gart gart coding downstream 987788 30672152 ~ 30711252 (+)
adamts5 adamts5,LOC107751075,LOC107698897 coding downstream 1576916 31261280 ~ 31300421 (+)
G107075 NA non-coding upstream 9752 29674096 ~ 29674334 (+)
G107074 NA non-coding upstream 27852 29655911 ~ 29656234 (+)
G107064 NA non-coding upstream 62574 29615278 ~ 29621512 (+)
G107057 NA non-coding upstream 83502 29597258 ~ 29600584 (+)
G107056 NA non-coding upstream 87072 29595038 ~ 29597014 (+)
G107096 NA non-coding downstream 12338 29696702 ~ 29698661 (+)
G107104 NA non-coding downstream 33808 29718172 ~ 29718407 (+)
G107106 NA non-coding downstream 36262 29720626 ~ 29720867 (+)
G107111 LOC108264080 non-coding downstream 68372 29752736 ~ 29753240 (+)
G107113 NA non-coding downstream 83167 29767531 ~ 29767994 (+)
LOC111193573 NA other upstream 524406 29149065 ~ 29159680 (+)
LOC103027743 NA other upstream 960060 28703067 ~ 28724026 (+)
G106673 NA other upstream 1617103 28066352 ~ 28066983 (+)
G106661 lancl1 other upstream 1662039 28014516 ~ 28022047 (+)
LOC103037236 NA other upstream 3512285 26154417 ~ 26171801 (+)
G107117 NA other downstream 95962 29780326 ~ 29780927 (+)

Expression


Co-expression Network