G107106


Basic Information

Item Value
gene id G107106
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 29720626 ~ 29720867 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU144740
gggttggagaataaaactgaaacacctggttttagagcacaataattgattgtggtgacggacagttctggtggaaacaggagagttgaggtgcacattgaattctgtcgtgatttgatcagccgtggttttatgttttttggatacaatccgggttagcacccgaacatccctttcagacagcttcctcttacagcatccacagttaatcctgttggatgtggttggttcttcttggtggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144740 True 242 lncRNA 0.44 1 29720626 29720867

Neighbor

gene id symbol gene type direction distance location
LOC111193470 NA coding upstream 62204 29656537 ~ 29658422 (+)
LOC103025432 NA coding upstream 132504 29563196 ~ 29588122 (+)
donson LOC107555241 coding upstream 162583 29538337 ~ 29558043 (+)
LOC103025657 runx1,LOC108429862,LOC107571884 coding upstream 200792 29417222 ~ 29519834 (+)
LOC103024513 LOC107555266,LOC106574727,LOC106575573,LOC108429863,LOC107568777,LOC107709315,LOC107718016,LOC105889574,LOC100333907 coding upstream 479029 29208551 ~ 29241597 (+)
ncam2 ncam2,LOC107721821,LOC107698913,LOC107751079 coding downstream 123233 29844100 ~ 30451601 (+)
LOC111193471 NA coding downstream 819394 30540261 ~ 30547361 (+)
LOC111193577 LOC108429857,LOC108258902 coding downstream 941132 30661999 ~ 30668744 (+)
gart gart coding downstream 951285 30672152 ~ 30711252 (+)
adamts5 adamts5,LOC107751075,LOC107698897 coding downstream 1540413 31261280 ~ 31300421 (+)
G107104 NA non-coding upstream 2219 29718172 ~ 29718407 (+)
G107096 NA non-coding upstream 21965 29696702 ~ 29698661 (+)
G107094 NA non-coding upstream 36262 29684086 ~ 29684364 (+)
G107075 NA non-coding upstream 46292 29674096 ~ 29674334 (+)
G107074 NA non-coding upstream 64392 29655911 ~ 29656234 (+)
G107111 LOC108264080 non-coding downstream 31869 29752736 ~ 29753240 (+)
G107113 NA non-coding downstream 46664 29767531 ~ 29767994 (+)
G107121 NA non-coding downstream 87708 29808575 ~ 29808815 (+)
G107127 NA non-coding downstream 110870 29831737 ~ 29831968 (+)
G107175 NA non-coding downstream 298097 30018964 ~ 30082411 (+)
LOC111193573 NA other upstream 560946 29149065 ~ 29159680 (+)
LOC103027743 NA other upstream 996600 28703067 ~ 28724026 (+)
G106673 NA other upstream 1653643 28066352 ~ 28066983 (+)
G106661 lancl1 other upstream 1698579 28014516 ~ 28022047 (+)
LOC103037236 NA other upstream 3548825 26154417 ~ 26171801 (+)
G107117 NA other downstream 59459 29780326 ~ 29780927 (+)

Expression


Co-expression Network