G107127



Basic Information


Item Value
gene id G107127
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 29831737 ~ 29831968 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU144764
aatatatttgaagtcacgggccacagactctgtaataaaacaaataatgaaatataccactttaaataatacattttcctgattatttcatttacacaccattttacttgacttactatctttatctctgacagtgttgtgtaaactaagatttttcaaattgatgtttcatttcatgatgtctcttaatattaaactccttaattacggcaacttttagactctttggccc

Function


GO:

id name namespace
GO:0015250 water channel activity molecular_function
GO:0005372 water transmembrane transporter activity molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU144764 True 232 lncRNA 0.29 1 29831737 29831968

Neighbor


gene id symbol gene type direction distance location
LOC111193470 NA coding upstream 173315 29656537 ~ 29658422 (+)
LOC103025432 NA coding upstream 243615 29563196 ~ 29588122 (+)
donson LOC107555241 coding upstream 273694 29538337 ~ 29558043 (+)
LOC103025657 runx1,LOC108429862,LOC107571884 coding upstream 311903 29417222 ~ 29519834 (+)
LOC103024513 LOC107555266,LOC106574727,LOC106575573,LOC108429863,LOC107568777,LOC107709315,LOC107718016,LOC105889574,LOC100333907 coding upstream 590140 29208551 ~ 29241597 (+)
ncam2 ncam2,LOC107721821,LOC107698913,LOC107751079 coding downstream 12132 29844100 ~ 30451601 (+)
LOC111193471 NA coding downstream 708293 30540261 ~ 30547361 (+)
LOC111193577 LOC108429857,LOC108258902 coding downstream 830031 30661999 ~ 30668744 (+)
gart gart coding downstream 840184 30672152 ~ 30711252 (+)
adamts5 adamts5,LOC107751075,LOC107698897 coding downstream 1429312 31261280 ~ 31300421 (+)
G107121 NA non-coding upstream 22922 29808575 ~ 29808815 (+)
G107113 NA non-coding upstream 63743 29767531 ~ 29767994 (+)
G107111 LOC108264080 non-coding upstream 78497 29752736 ~ 29753240 (+)
G107106 NA non-coding upstream 110870 29720626 ~ 29720867 (+)
G107104 NA non-coding upstream 113330 29718172 ~ 29718407 (+)
G107175 NA non-coding downstream 186996 30018964 ~ 30082411 (+)
G107178 NA non-coding downstream 190933 30022901 ~ 30023644 (+)
G107181 NA non-coding downstream 199985 30031953 ~ 30035249 (+)
G107207 NA non-coding downstream 262199 30094167 ~ 30097747 (+)
G107243 NA non-coding downstream 335350 30167318 ~ 30168124 (+)
G107117 NA other upstream 50810 29780326 ~ 29780927 (+)
LOC111193573 NA other upstream 672057 29149065 ~ 29159680 (+)
LOC103027743 NA other upstream 1107711 28703067 ~ 28724026 (+)
G106673 NA other upstream 1764754 28066352 ~ 28066983 (+)
G106661 lancl1 other upstream 1809690 28014516 ~ 28022047 (+)

Expression



Co-expression Network