G107243


Basic Information

Item Value
gene id G107243
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 30167318 ~ 30168124 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU144899
gagagagagagatacagagagatacagagagagagagagagagagagagagagagaccaatgactggagtgagagaaagagctgcaattaaaaaaatgtctagtggaagtgatgcacggagacagacaccgattctccttatgaacattttcatcacctggtaagaaacccacaattacAGTATCATGAgtaaatgtctacaatgagcagtttaaagaacgtatagtgatttctagcttgtagtgtgaaaaaaagtatttatttgaatatctcaccaaaaaagtaaaatgaactgaactttgaactagttcagaattaaaattgtgaactttgaacgtgaactgttcactttgagc

Function

GO:

id name namespace
GO:0022857 transmembrane transporter activity molecular_function
GO:0005215 transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144899 True 356 lncRNA 0.37 2 30167318 30168124

Neighbor

gene id symbol gene type direction distance location
LOC111193470 NA coding upstream 508896 29656537 ~ 29658422 (+)
LOC103025432 NA coding upstream 579196 29563196 ~ 29588122 (+)
donson LOC107555241 coding upstream 609275 29538337 ~ 29558043 (+)
LOC103025657 runx1,LOC108429862,LOC107571884 coding upstream 647484 29417222 ~ 29519834 (+)
LOC103024513 LOC107555266,LOC106574727,LOC106575573,LOC108429863,LOC107568777,LOC107709315,LOC107718016,LOC105889574,LOC100333907 coding upstream 925721 29208551 ~ 29241597 (+)
LOC111193471 NA coding downstream 372137 30540261 ~ 30547361 (+)
LOC111193577 LOC108429857,LOC108258902 coding downstream 493875 30661999 ~ 30668744 (+)
gart gart coding downstream 504028 30672152 ~ 30711252 (+)
adamts5 adamts5,LOC107751075,LOC107698897 coding downstream 1093156 31261280 ~ 31300421 (+)
adamts1 adamts1,LOC107698918,LOC107751074 coding downstream 1144616 31312740 ~ 31319149 (+)
G107207 NA non-coding upstream 69571 30094167 ~ 30097747 (+)
G107175 NA non-coding upstream 84907 30018964 ~ 30082411 (+)
G107181 NA non-coding upstream 132069 30031953 ~ 30035249 (+)
G107178 NA non-coding upstream 143674 30022901 ~ 30023644 (+)
G107127 NA non-coding upstream 335350 29831737 ~ 29831968 (+)
G107250 NA non-coding downstream 30171 30198295 ~ 30198944 (+)
G107261 NA non-coding downstream 233502 30401626 ~ 30464931 (+)
G107128 NA non-coding downstream 280203 30448327 ~ 30455770 (+)
G107267 NA non-coding downstream 324877 30493001 ~ 30528484 (+)
G107342 NA non-coding downstream 547056 30715180 ~ 30716606 (+)
G107117 NA other upstream 386391 29780326 ~ 29780927 (+)
LOC111193573 NA other upstream 1007638 29149065 ~ 29159680 (+)
LOC103027743 NA other upstream 1443292 28703067 ~ 28724026 (+)
G106673 NA other upstream 2100335 28066352 ~ 28066983 (+)
G106661 lancl1 other upstream 2145271 28014516 ~ 28022047 (+)

Expression


Co-expression Network