G107267


Basic Information

Item Value
gene id G107267
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 30493001 ~ 30528484 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU144926
ATTGGGGGGCTGGTTGAGCGTGGCTGGTATGCCGACGGGAGTTTATTGAGCTGAATATTAGCATTTGTGGTGGTAGCTGCCAATCCACCGTTAACTCCTACCAGTGTAGCGTGTAAatagtttgtatatatattgtaaatttcgttttgttttcatttttgtttttgggttCGGGTGCTTAATTTGTCACAATCAACACTTCAAAAGGGATTCTTACCTGGTTCCGGACTGTTTTTGCGTCTCTGCCTCACCTCTCTCCGGTAACCTCCTGACCACTTgtcctcacactaccacaAAGGCTTTAA
>TU144928
GGGTGTGATGATGTCAGGGCCCTGAATACATCACCACCAACTCCAGAGACATTTTACCtgcaaagacatttttacacaaacacagtacTTACCTGGATCCTGTGGAAATGGCGGCGCGCGAGCCACCCGGGTCCTTAAGGTCTGGGTAGAGACCAAGGGGTGTCCTGGGGCAGGGGAGCCTGGGGGTACCTGGTTCCGGACTGTTTTTGCGTCTCTGCCTCACCTCTCTCCGGTAACCTCCTGACCACTTgtcctcacactaccacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144926 True 305 lncRNA 0.44 2 30493411 30528484
TU144928 False 268 lncRNA 0.56 2 30493001 30493706

Neighbor

gene id symbol gene type direction distance location
ncam2 ncam2,LOC107721821,LOC107698913,LOC107751079 coding upstream 41400 29844100 ~ 30451601 (+)
LOC111193470 NA coding upstream 834579 29656537 ~ 29658422 (+)
LOC103025432 NA coding upstream 904879 29563196 ~ 29588122 (+)
donson LOC107555241 coding upstream 934958 29538337 ~ 29558043 (+)
LOC103025657 runx1,LOC108429862,LOC107571884 coding upstream 973167 29417222 ~ 29519834 (+)
LOC111193471 NA coding downstream 11777 30540261 ~ 30547361 (+)
LOC111193577 LOC108429857,LOC108258902 coding downstream 133515 30661999 ~ 30668744 (+)
gart gart coding downstream 143668 30672152 ~ 30711252 (+)
adamts5 adamts5,LOC107751075,LOC107698897 coding downstream 732796 31261280 ~ 31300421 (+)
adamts1 adamts1,LOC107698918,LOC107751074 coding downstream 784256 31312740 ~ 31319149 (+)
G107261 NA non-coding upstream 28070 30401626 ~ 30464931 (+)
G107128 NA non-coding upstream 37231 30448327 ~ 30455770 (+)
G107250 NA non-coding upstream 294057 30198295 ~ 30198944 (+)
G107243 NA non-coding upstream 324877 30167318 ~ 30168124 (+)
G107207 NA non-coding upstream 395254 30094167 ~ 30097747 (+)
G107342 NA non-coding downstream 186696 30715180 ~ 30716606 (+)
G107389 NA non-coding downstream 204184 30732668 ~ 30732900 (+)
G107394 NA non-coding downstream 215193 30743677 ~ 30744047 (+)
G107396 NA non-coding downstream 216947 30745431 ~ 30745631 (+)
G107397 NA non-coding downstream 232186 30760670 ~ 30790277 (+)
G107117 NA other upstream 712074 29780326 ~ 29780927 (+)
LOC111193573 NA other upstream 1333321 29149065 ~ 29159680 (+)
LOC103027743 NA other upstream 1768975 28703067 ~ 28724026 (+)
G106673 NA other upstream 2426018 28066352 ~ 28066983 (+)
G106661 lancl1 other upstream 2470954 28014516 ~ 28022047 (+)

Expression


Co-expression Network