G107389


Basic Information

Item Value
gene id G107389
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 30732668 ~ 30732900 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU145072
tagactcttttgccctgtttttctgcgctagaaatgcacactctctccgcttttagactctttgccctgtttttctgcgctagaaatgcgcaccctctccgcttttagactcttttgtccgtttttctgcgatagaaatgcgcactctctccgcttttagactcttttgccctgtttttctgcgctagaaatgcgcactctctccgcttttagactctttgccctgtttttct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145072 True 233 lncRNA 0.46 1 30732668 30732900

Neighbor

gene id symbol gene type direction distance location
gart gart coding upstream 21416 30672152 ~ 30711252 (+)
LOC111193577 LOC108429857,LOC108258902 coding upstream 63924 30661999 ~ 30668744 (+)
LOC111193471 NA coding upstream 185307 30540261 ~ 30547361 (+)
ncam2 ncam2,LOC107721821,LOC107698913,LOC107751079 coding upstream 281067 29844100 ~ 30451601 (+)
LOC111193470 NA coding upstream 1074246 29656537 ~ 29658422 (+)
adamts5 adamts5,LOC107751075,LOC107698897 coding downstream 528380 31261280 ~ 31300421 (+)
adamts1 adamts1,LOC107698918,LOC107751074 coding downstream 579840 31312740 ~ 31319149 (+)
cyyr1 cyyr1,LOC107751099 coding downstream 592794 31325694 ~ 31341351 (+)
app app,appa,LOC108258852,LOC107593741,LOC107698920 coding downstream 614401 31347301 ~ 31402273 (+)
G107342 NA non-coding upstream 16062 30715180 ~ 30716606 (+)
G107267 NA non-coding upstream 204184 30493001 ~ 30528484 (+)
G107261 NA non-coding upstream 267737 30401626 ~ 30464931 (+)
G107128 NA non-coding upstream 276898 30448327 ~ 30455770 (+)
G107250 NA non-coding upstream 533724 30198295 ~ 30198944 (+)
G107394 NA non-coding downstream 10777 30743677 ~ 30744047 (+)
G107396 NA non-coding downstream 12531 30745431 ~ 30745631 (+)
G107397 NA non-coding downstream 27770 30760670 ~ 30790277 (+)
G107399 NA non-coding downstream 28805 30761705 ~ 30802847 (+)
G107424 NA non-coding downstream 180637 30913537 ~ 30913873 (+)
G107117 NA other upstream 951741 29780326 ~ 29780927 (+)
LOC111193573 NA other upstream 1572988 29149065 ~ 29159680 (+)
LOC103027743 NA other upstream 2008642 28703067 ~ 28724026 (+)
G106673 NA other upstream 2665685 28066352 ~ 28066983 (+)
G106661 lancl1 other upstream 2710621 28014516 ~ 28022047 (+)

Expression


Co-expression Network