G107397


Basic Information

Item Value
gene id G107397
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 30760670 ~ 30790277 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU145080
ggtatgctgacattaccctggataccgtggctcttgatacatcaaaaagacttgctgtcttggtcacagatgcgccagcaagacgtgcaccaacaatttgtcctcttttgaactctggtatgtctcccataatgttgtgtgcattgcaatattaatattttgagcagaactgtgctcttaccctgctaattgaaccttcacactctgctcttactggtgcaataatgtgcaattaatgaagattgaacaccaggctgctccaatttagccatgaaacctaaaatcccac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145080 True 289 lncRNA 0.43 2 30760670 30790277

Neighbor

gene id symbol gene type direction distance location
gart gart coding upstream 49418 30672152 ~ 30711252 (+)
LOC111193577 LOC108429857,LOC108258902 coding upstream 91926 30661999 ~ 30668744 (+)
LOC111193471 NA coding upstream 213309 30540261 ~ 30547361 (+)
ncam2 ncam2,LOC107721821,LOC107698913,LOC107751079 coding upstream 309069 29844100 ~ 30451601 (+)
LOC111193470 NA coding upstream 1102248 29656537 ~ 29658422 (+)
adamts5 adamts5,LOC107751075,LOC107698897 coding downstream 471003 31261280 ~ 31300421 (+)
adamts1 adamts1,LOC107698918,LOC107751074 coding downstream 522463 31312740 ~ 31319149 (+)
cyyr1 cyyr1,LOC107751099 coding downstream 535417 31325694 ~ 31341351 (+)
app app,appa,LOC108258852,LOC107593741,LOC107698920 coding downstream 557024 31347301 ~ 31402273 (+)
G107396 NA non-coding upstream 15039 30745431 ~ 30745631 (+)
G107394 NA non-coding upstream 16623 30743677 ~ 30744047 (+)
G107389 NA non-coding upstream 27770 30732668 ~ 30732900 (+)
G107342 NA non-coding upstream 44064 30715180 ~ 30716606 (+)
G107267 NA non-coding upstream 232186 30493001 ~ 30528484 (+)
G107424 NA non-coding downstream 123260 30913537 ~ 30913873 (+)
G107430 NA non-coding downstream 140286 30930563 ~ 30930808 (+)
G107432 NA non-coding downstream 163022 30953299 ~ 30954409 (+)
G107446 NA non-coding downstream 360721 31150998 ~ 31151574 (+)
G107448 NA non-coding downstream 363203 31153480 ~ 31153699 (+)
G107117 NA other upstream 979743 29780326 ~ 29780927 (+)
LOC111193573 NA other upstream 1600990 29149065 ~ 29159680 (+)
LOC103027743 NA other upstream 2036644 28703067 ~ 28724026 (+)
G106673 NA other upstream 2693687 28066352 ~ 28066983 (+)
G106661 lancl1 other upstream 2738623 28014516 ~ 28022047 (+)

Expression


Co-expression Network