ing1 (ing1)


Basic Information

Item Value
gene id ing1
gene name ing1
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 17892761 ~ 17896437 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007228697.3
CCGGGGGTTAAAAcataaacacccacacacatacagaaacacacGAGAAGAACATGTTCTAGGTTGATAGTCATGAGTGTGACTCGCCACAAACAGCCGGGGAGTGCTCGTCCTAcgctggcgcatgcgcagtggcGCATCCAGACTGTTCCCCAAGTGTTTGAAACTACCCGGAGGATCTCTCCACGTTTGGAGGGAGCAAGTAATGCGACACAGGAGGCGTTTACGCTACAAACCTGGACAGCGACATAACTACAGCTTTTGTGCCgatctcttcctcttctctggATCCCTTTTTAAGCCTCTTTAAACGTGGCATGCTTCTTTTTTAAGCTGATTTTTCAGCTCCAAGTTCGGTCCAGTGCTTCATAGATAGGGGAGTCCTCGCATTGGGTGCCACACACTGGCTAATCGAGCTGCTCGGACATAATAACAAatgcttttttctgttttgtcgacGGAAAGACTCGTTTCGTGCGTATGTCAGCTAGTTAAGCTTTAAGTGGACTACCGGGAGCTGAAATGCTGAACACTGCCAGCTGGGACCCGCTGCACGTTGCCAACTATGTGGCTGAATATCTGGACTTGGTTGAATCGCTGCCGTTCGACCTACAAAGAAACGTGTCCCTCATGAGAGAGATCGACTCGAAATATCAAGAAATCCTTAAAGAGCTTGATGAGGCGTACCAGAAGCACAGCCAAGAGGAGGACCCAATCCAGCGGAGGCGCCTTCTGCACTGCATCCAGCGAGCCTTGATCCGAAGCCAGGAGTTGGGCGACGAGAAGATCCAGCTGGCAAGCCAGATGGTAGAATTGGTAGAGAACCGCAGCCGGCAAGTGGATGGTTTCGCCGAGCTCCTGGAAGCCCAAAACGAGCCTCACGATAATGCACCAGCTGCTTCCATGACCACAATCGTGCCTGGAAAGAAGCGAGAGGAGGAAAAGCGCAGAGAAGAGACCATAGGTTTGGTCGATCGTTTGGCAGGCAGCAACAAGCGCTCAAGGCGGCAGAAGGTCAACAGCAATGAGAACCGTGAGAACGCTTCTGCCAGTCACCATGATGAAGTGGTCAGCATCACGGGCAGGGAGAAGAGAGCCAAGACatcgaagaagaagaagaggtcCAAAGCCAAGCAGGAGAGAGAGGCATCGCCAGCTGACCTGCCAATTGACCCCAACGAGCCCACCTACTGTCTCTGCGAGCAGGTGTCTTATGGGGAGATGATAGGTTGCGACAATGACGAATGTCCCATCGAGTGGTTCCATTTCTCATGTGTTGGGCTCAATCATAAGCCCAAAGGGAAGTGGTATTGCCCTAAATGCAGGGGGGACACAGAGAAAACTATGGACAAAGCCTTGGAAAAATCCAAAAAGGAGAGGGGCTATAACAGGTAGCTGCCTTCCTGATGAACTGCACAGcaatgttaatatttatatttatttgttatatataaatctataaatctatttGTTTAACACTAGAAGGATTCACTTCATTGTTTCATATACATGTCCGTTTGTCACCTCAGTACAAAGTTTTATGTGAGTGTTGTCACCTAGCAAAGTAGCACTAAAGGGCTTAAACTCAGCCTTTTGAGTTGAACGATATGAGATGTGCCAGCGACACTCTCAAAGATGTATTTCATTTGAATGTGAATGTCAGATTTGTGAGTATGTGTCCAACTATAGTTAGACAAGCAGTATGATTGACAGAAGTATTGTTTTGTGAAGGCACTTGCAGCATGTGGCTGTCGTTTGTTAAATATTTGAACAGAGCTGTCCTCATGTCcactaataaaaatatgaaattctca

Function

symbol description
ing1 Predicted to enable methylated histone binding activity. Predicted to be involved in positive regulation of transcription, DNA-templated. Predicted to act upstream of or within chromatin organization; negative regulation of cell population proliferation; and regulation of cell death. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in head and neck squamous cell carcinoma and squamous cell carcinoma. Orthologous to human ING1 (inhibitor of growth family member 1).

NR:

description
PREDICTED: inhibitor of growth protein 1

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K19197 ING1; inhibitor of growth protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007228697.3 True 1814 mRNA 0.48 2 17892761 17896437

Neighbor

gene id symbol gene type direction distance location
LOC103032976 si:dkey-1h24.2,LOC108434752,LOC108258345,LOC107707829,LOC560392 coding upstream 419364 17424943 ~ 17473397 (+)
LOC103030825 NA coding upstream 567395 17322245 ~ 17325366 (+)
map4k4 map4k4,LOC108258915,LOC106574534,LOC106575325,LOC107668172,LOC107588849,LOC107707082 coding upstream 575558 17213834 ~ 17317203 (+)
lonrf2 lonrf2 coding upstream 693146 17183013 ~ 17199615 (+)
chst10 chst10 coding upstream 743153 17142533 ~ 17149608 (+)
hsf2bp LOC106595116 coding downstream 38422 17934859 ~ 17944725 (+)
LOC103027494 NA coding downstream 53584 17950021 ~ 17962718 (+)
gemin8 gemin8 coding downstream 101878 17998315 ~ 18006511 (+)
LOC103032361 gpm6ba,LOC108434682,LOC108259029,LOC107552377,LOC107588840,LOC107654257,LOC107667658 coding downstream 112865 18009302 ~ 18082462 (+)
LOC103032036 LOC108258971,LOC108434686,LOC107588835,LOC107667659,LOC107742634,LOC107739811,LOC107700106,LOC107552381 coding downstream 296261 18192698 ~ 18214872 (+)
G104363 NA non-coding upstream 30901 17861635 ~ 17861860 (+)
G104204 NA non-coding upstream 190842 17701687 ~ 17701919 (+)
G104196 NA non-coding upstream 295317 17597148 ~ 17597444 (+)
G104190 NA non-coding upstream 407575 17482124 ~ 17485186 (+)
G104183 LOC103030517,LOC108434725,LOC100705727,LOC101474240,LOC102192248,LOC103374257,LOC106510766 non-coding upstream 536270 17354429 ~ 17356491 (+)
G104374 ube2a,ube2al,LOC107702882,LOC103029486,LOC107552373,LOC108266561,LOC103021436,LOC108259060,LOC107588833,LOC105934920 non-coding downstream 232 17896669 ~ 17965475 (+)
G104378 NA non-coding downstream 7518 17903955 ~ 17905999 (+)
G104383 NA non-coding downstream 28513 17924950 ~ 17992449 (+)
G104392 NA non-coding downstream 74497 17970934 ~ 17992147 (+)
G104396 cbs,LOC107715910,LOC106593678,LOC107557921,LOC106562750 non-coding downstream 80859 17977296 ~ 17982804 (+)
LOC111193547 NA other upstream 473623 17406595 ~ 17419138 (+)
LOC103031769 prps2 other upstream 753788 17119847 ~ 17138973 (+)
LOC103035065 nhlh2,LOC103035065,LOC108434665,LOC108258389,LOC107739819,LOC105019883 other upstream 998169 16888386 ~ 16894592 (+)
LOC103037450 NA other upstream 1318328 16555694 ~ 16574433 (+)
col17a1 col17a1,LOC108434660,LOC107684270,LOC107583183 other upstream 1384974 16463938 ~ 16507787 (+)
G104656 pcdh8 other downstream 1022623 18919060 ~ 18923203 (+)
nfkbiz nfkbiz other downstream 1837789 19734226 ~ 19744924 (+)
G105276 NA other downstream 3092836 20989273 ~ 21055483 (+)
G105312 abcb6,abcb6a,LOC107556273,LOC107750068 other downstream 3122601 21019038 ~ 21028990 (+)
G105357 NA other downstream 3430755 21327192 ~ 21369204 (+)

Expression


Co-expression Network