LOC103037816 (cunh3orf70,LOC108435969,LOC107556711,LOC105912663,LOC102778299)


Basic Information

Item Value
gene id LOC103037816
gene name cunh3orf70,LOC108435969,LOC107556711,LOC105912663,LOC102778299
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 6692275 ~ 6733982 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007246654.3
gagagggaggagagagagaggaagaggagggcgtggaaggatagagagagaagaaagaaggcTGGAACGAAGAGATCAGCGAGCTTGGAGCTACACAGGCGAGGAGAGGAAGGAGAAGGTCGTGAAGGTTCCCGCTGCTGCTGAAACCGCGCGAGCTGCAGCCTATTAATTAAAGAGATACATGGCGGAGGAGGCTACGGCTGGGCGCGCGCTCGCTCGCGAGTGGATAAGCTCAGTTGATTGTTGATGCGCCAACGCTACGGCTACTGGCTGAGATCCTGGAGATGCTGGAGATCCTGGAGATTTTAAACAGCACACTGAACGCACaggactgatctgcatattgattgattgatcgatTGAAGAAGAGAATTAATCCACtgctattattttatattgataGTCTTTTATTCTCATCCACCCTTTCCATTTCCTGGACCACTGGTGGACTCAAAGCCCACCCCGACTGATCCGATGCGGTTCCCCCGGCGGATCTGATCCCAGCCCGGGATCCCCGCCCCGCCATGGCCGCGTCCGGTGGCCCCAAGAGCGAGAAGTTGGACGAGGCTCAGGCTCTGGCCAAAAGCTGCGCCGGACGCCCGGATTTCTTGCCCTGCGATGGGCTGTCCATCTGCGCCACGCACAGCCACGGCAAGTGCTTCAAACTGCACTGGTGCTGCCACCTGGGCTGGTGCCACTGTAAATATGTCTACCAGCCGATGACCAGTGTCTGCCAGCTTCCCAGCACCTCCGTCCCTGCCACGCCCTCCGACAACACCCATACCATGAACCTGTCCATCTCCCTGACTGAGCGCCTCCTCAGAACCGCCTCCAACTTCAAAGCCCCTCCGTGCCCAGAGTCGCCCAAGTTCTGCGTCATCTCGGACCTCTTCATCGACGACTACATCGTGAAACGGATCAACGGGAAGATGTGCTACGTGCAGAGACCTCCACCGCCGATGCCCAGCCCACCGCAGCAGCCTCAGGCTTTGAAAACCCAAGCGCCCACTCAGAGGGTCCACAAGCAAGTGGCGCAAGTTGGGCAAACTCAAGGCAAGCAAGGTCAAAAAGCAGGACCCAAAATGGATCACTGTTCTTCGCCGTCCAGCTCGGAAGACTCTGGCATCAACGCGCTGGGTCTGCATTATATGGAGTCGTGCGACGAAGACTCCTGTGAGGAcgatgaggatgaggaagaggaggaggacgacGAGCTGAGCACAGACGGGGACTCAAGTCCTGGTAGCCTGTGGGAGCAAGACGAGTGCACCTTGCTTTCACCATCCAAGTCTATGGTAGAGATTATCGAGAAAATCGAGACGACCGTCTGATGCGTTGAGACGTTCCACAAGACGACAACCCAAGCCGTTGACGCATCCCGTGGTCTTCGACTTCAATTTCGACATCGATATCAATCGATGATCGATTGGATGGGACTTGACCACTGTTTGGATGAACCATGAAGCGAATAGGCAAAAGCCAAGAGAACACATACATACCCACACTTTCCCACTTCCacaatgtctgtctgtctgtctgtttgtctgtgcaCCTGAGATGTTTCCACGTCTTTATCTTGTCTTTTCTTCTGTCATCATCTTGAcattatcacagttttcttttGGGATGTTAGCCCTACTTATggattatatatactgtacaacaGAGTTCACAAGTACATAGAAAGTTATCAAAGGTCAGGCCGAAAGTCGTAGGCTTttgaataaatggatggattgatggatggatggatggatggatggatggatggatggatggatggactgatGGATAGATGATGAATTCCTTGTCCAGCGACGACATgatttaaaagtatttctggCACAAATGTACCGTGCATTCTAAGGAGTTCCCCACCTTAAAGGAATGGGGGATAAGAGATGTTTCCACGTCTTTATCGTGTCTTGTCTTCTTCTCATCATCTTGACATTATCATAGTCTTCTCTTGGGATGTTGGCCCTACTTATggattatatatactgtacaacaGAGTTCACAAGTACACAGAAAGTTATCAAAAGTCGTGGCCGAAAGTCCTAGGCTtttggatgcatggatggattgatggatggatggatggatggatgaatgaattcCTCGTCCAGCGACAACATGGTTTAAAAGTATTTCTGGCACAATTCACCGTGCATACTAAGGAATTTGCCCTCAAAGGAATGGGGGAAAAAGGACAaagatgaatgaaaatgaaagaaaggagGTCTAAGCAATAGAAGAAAAAATGAGAAGCACCATCCCCCCGCTGGGTGGAaagacatgcaaaaaaaaaaggtcttggactgtgaaagagaaggagatggg

Function

NR:

description
UPF0524 protein C3orf70 homolog A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007246654.3 True 2340 mRNA 0.50 3 6692275 6733982

Neighbor

gene id symbol gene type direction distance location
igf2bp2 igf2bp2,LOC108435967,LOC105911772,LOC107749880,LOC107704342 coding upstream 58909 6553811 ~ 6633366 (+)
LOC103036567 LOC108435966 coding upstream 143929 6538347 ~ 6548346 (+)
LOC103031597 ubac2 coding upstream 162962 6521314 ~ 6529313 (+)
LOC111193520 NA coding upstream 179017 6512464 ~ 6513258 (+)
LOC103025984 ubac2 coding upstream 190657 6484337 ~ 6501618 (+)
alg11 alg11,LOC107556718 coding downstream 442546 7176528 ~ 7183893 (+)
spp2 NA coding downstream 456342 7190324 ~ 7196997 (+)
LOC103040632 LOC108435946,LOC107747441,LOC107676094 coding downstream 538576 7272558 ~ 7281839 (+)
pld6 pld6,LOC107583251 coding downstream 551510 7285492 ~ 7289120 (+)
LOC103040938 rab3da,LOC103040938,LOC108435977,LOC108258507,LOC107757002,LOC107747429,LOC107675349,LOC107569532 coding downstream 560303 7294285 ~ 7318919 (+)
G101583 NA non-coding upstream 3643 6688285 ~ 6688632 (+)
G101490 NA non-coding upstream 65267 6579257 ~ 6627008 (+)
G101472 NA non-coding upstream 126094 6493969 ~ 6566181 (+)
G101483 NA non-coding upstream 155373 6529751 ~ 6536902 (+)
G101485 NA non-coding upstream 158517 6532003 ~ 6533758 (+)
G101610 NA non-coding downstream 264108 6998090 ~ 7013954 (+)
G101609 NA non-coding downstream 265104 6999086 ~ 7094070 (+)
G101626 NA non-coding downstream 360565 7094547 ~ 7120309 (+)
G101620 NA non-coding downstream 384884 7118866 ~ 7119981 (+)
G101636 NA non-coding downstream 440683 7174665 ~ 7174889 (+)
G101452 NA other upstream 284464 6282025 ~ 6407811 (+)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other upstream 389573 6300114 ~ 6302702 (+)
G100975 NA other upstream 1600527 5086760 ~ 5091748 (+)
atg4d atg4d other upstream 2046919 4629123 ~ 4645356 (+)
G100820 akt3b,LOC108438606,LOC108259077,LOC107594289,LOC107729704,LOC107703832,LOC101071975 other upstream 2424449 4250083 ~ 4267826 (+)
LOC103032856 march9,LOC108435943 other downstream 221337 6955319 ~ 6997446 (+)
G101622 zc3h13 other downstream 410820 7144802 ~ 7146340 (+)
LOC103042156 NA other downstream 650775 7384757 ~ 7393225 (+)
G102015 NA other downstream 1980857 8714839 ~ 8719235 (+)
LOC103025691 NA other downstream 2063763 8797745 ~ 8836081 (+)

Expression


Co-expression Network