LOC103044305


Basic Information

Item Value
gene id LOC103044305
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 7542340 ~ 7560927 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007246677.3
GTCTCGAGCTCCTCTCAGACGCTCGCTCGCGCACtcactcagtcagtcagtcagaaattcagtcacacacacagacacgcttGCACGCGCGCGCTCGCTCGCCCGCCGTCCCTCCGATGCGATCAGCTCGCGCTGAAGAAGCTCGTGCGAGGCGGGGAAACGGACAGGGTCGCGCGGACGGACGCGTTTGATGGCAGCAGCGCTCCTCACAGCCACGAGCTCCGCGCTCGCGCCGCCGGGACCGGACGGGTACTGCGGGGAGGACCCCTGCGCCCTCTTCCACTTCGACTGCAAGACCCCCCAGCCGGACAGGGTGTTGGCCAACGAGTATGCGCAGGCGAAGCTCGAGATGGACAAATACCTGACGCCTCAGCTCCAGGCTTCTCCATTGGCCAAGAAGGACCACCGCGAGAGCTTGTCGGTGGTGGACCAGTTGTTTGGGGACGACCAGGGCTCCCCGTACAGCATCAACATGAACGTCTACTTGCCTGACATTGCCTACCTGCGCACTGGCCTGTGCCGCCCGGCCCGGTCTTCCCTCCCCAGCCAAGCTAAAAGCAAGCTGGTGAACTCCTCCCCCTTCTCCTCTCCACTGGACTGCCCCATCAGCACCTCCATCCCAGCTCCACCAACACTGCCAGAGTTCACCAGCATCTTCAGCTCGGCTTCTGGACCGGGCGTCGGCGGCATGGATGCCTGCGATGCTTCCTCCAGCATCTTTGTCAAGCAGGAGATGCCCTCTTTTGAGCTTCCCCAGGACGGCCACCTCTTCCACCTGCTCAACTCGGAGCTGGACGACCCAATCCATGGTGTCTCAGACTCTCATAATCACAACCACAACCATGCCCACACCCATGGCCTGCCCTCACAGGTGCCTTCCCAGGTGCCCTCGCAGGTGCCTGCCTTCCACGACCTGCACCTGCCTGCCCCACAGACTGAGGTCAAGCCCTACTGCGGCATGCAGGCATCTGGGTACCACATGGGTCCGTCTCACTTCGCTCAGGGCCAGGCACAGGCCAAGTCCCCCTACCTCCCGCCCTCGCCGCCAAGTTCCGAACCCGGCAGCCCAGATCGACAGAAAGAGCTGCTGCAAAACCTGACGCCTCCTCCGTCTTATGCTGCCACCATTGCGTCCAAAATGGGGGTCCACACACCCAGTCATCCCATGCCCACGTCCTCGAGCACTCCTGCAAATTCCGGAACTGTAGGCATGCCGGTCCGCTACAACCGCAGGACGAATCCTGACCTGGAGAAGAGGCGGATACACCACTGCGACTTTCCAGGCTGTAAGAAGGTTTACACCAAGTCCTCGCATCTGAAAGCTCATCTGAGGACGCACACCGGCGAGAAGCCGTACAGGTGCAATTGGGAGGGCTGCGACTGGCGCTTCGCCCGCTCCGACGAGCTCACGCGCCACTTCCGGAAACACACGGGAGCCAAGCCTTTCCAGTGCGCCGTGTGCAGCCGCAGCTTCTCACGCTCCGACCACCTCGCCCTGCACATGAAGAGACATCAGAActaatcacacacactctctaacaaacacacacttttatatactgtatgaaattactgtatacacacacacacactgacaatcatcacacatatacacagtacacaaatacacagatacacacacaggcctacatttatacattttgtaCAGGCatagctacacacacacatatacatatacatactaCAAAGCTAATTATGCACTTGAAGAGACActagaacaacacacacacacacaaacacttttgTAGCCAATTTAGACGACCCTTCTTTAGTATCTAAGGTGAATTTCTCCCTTCAACTTGTTCACACTGTGTTTACAAGCTTCAGCTCCCAACCCATCAGTCCAATCTTTAATAGTCTTTAATAGATCTGATCTGCCCTCTAAAGCTATTACAAAACatgtataataattaaaaatacatatatataataaaaataatataataataataaggtgcAAGGGGGTGAAGGCCCTACatacaaattatattataaaaaagctACCATAAGATAAGTCTCTATCTGATGAACTGTATATGTAAGGACAGGCACACACAGATaccaatataaaatgtattaattattaattttatcgaAGCAGTTAGGCTTACAGGGGTAGTtagagacaggcagggtcagtatcaAAATGGcagagataataaaaaaaacatataccagAGTGAGAAGGCAAAATGATCATACTCAGCAAATTCAACACGTAAAAGGCTAGGTAAAAAGAGAAATCTAAATacaacagtacagtacaggaaCAACAGTAACAGGAGGGTATTTATACAAAGACAGATAGGTGTGGGCAATAAAAAGCTCGGTGAGCGTGATCAGGAGTCCAGAGCATGCAGACTGACAgtatatatcattttatataatataacagggCTGCACAGTACTCAGCATTACTTAATATTGTtccagaattaaaattgtgtaatCTCAGTAgagcaatgttttattttttaaattatatttatctatatctATACAGTAACATTAATTTTACTCCAAACGTTGGGTAAACAGAGTGATTTACTTTATATTGACACGTTGGGTCACTGACCTTCAGTAATGTTACTTGtaaattttttaccttttaaagtttaatagaacaatatatattgca

Function

GO: NA

KEGG:

id description
K09206 KLF5; krueppel-like factor 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007246677.3 True 2659 mRNA 0.50 4 7542340 7560927

Neighbor

gene id symbol gene type direction distance location
pibf1 pibf1 coding upstream 3706 7469343 ~ 7538634 (+)
tpt1 tpt1,LOC107691594,LOC107567988,LOC107598740,LOC107654875 coding upstream 98845 7435630 ~ 7443495 (+)
LOC103041253 NA coding upstream 197276 7338167 ~ 7345064 (+)
LOC103040938 rab3da,LOC103040938,LOC108435977,LOC108258507,LOC107757002,LOC107747429,LOC107675349,LOC107569532 coding upstream 223421 7294285 ~ 7318919 (+)
pld6 pld6,LOC107583251 coding upstream 253220 7285492 ~ 7289120 (+)
LOC103034778 LOC108437774 coding downstream 148372 7709299 ~ 7770528 (+)
LOC103023156 NA coding downstream 980067 8540994 ~ 8543564 (+)
LOC103024012 creb1a,LOC107757658,LOC107714305,LOC108437762,LOC107552236,LOC107691602 coding downstream 1089193 8650120 ~ 8664508 (+)
LOC111193523 NA coding downstream 1123977 8684904 ~ 8686520 (+)
LOC103036357 NA coding downstream 1279147 8840074 ~ 8851853 (+)
G101777 NA non-coding upstream 42503 7497431 ~ 7499837 (+)
G101776 NA non-coding upstream 43843 7496470 ~ 7498497 (+)
G101767 NA non-coding upstream 89975 7449913 ~ 7452365 (+)
G101679 LOC107655627,LOC107559781,LOC108256914,LOC108437766,LOC105901645 non-coding upstream 159865 7378262 ~ 7382475 (+)
G101676 NA non-coding upstream 170943 7371071 ~ 7371397 (+)
G101832 NA non-coding downstream 166230 7727157 ~ 7727563 (+)
G101836 NA non-coding downstream 225826 7786753 ~ 7798517 (+)
G101862 NA non-coding downstream 260511 7821438 ~ 7821748 (+)
G101863 NA non-coding downstream 288388 7849315 ~ 7849533 (+)
G101868 NA non-coding downstream 346580 7907507 ~ 7908973 (+)
LOC103042156 NA other upstream 149115 7384757 ~ 7393225 (+)
G101622 zc3h13 other upstream 396000 7144802 ~ 7146340 (+)
LOC103032856 march9,LOC108435943 other upstream 544894 6955319 ~ 6997446 (+)
G101452 NA other upstream 1134529 6282025 ~ 6407811 (+)
G102015 NA other downstream 1153912 8714839 ~ 8719235 (+)
LOC103025691 NA other downstream 1236818 8797745 ~ 8836081 (+)
trnar-ucu_1 NA other downstream 1272913 8833840 ~ 8833931 (+)
G102411 LOC107747660 other downstream 2964750 10525677 ~ 10526160 (+)
LOC111193528 NA other downstream 3307650 10868577 ~ 10870156 (+)

Expression


Co-expression Network